RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 SEPT8Q92599 483 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 ZNF334Q9HCZ1 680 aaPredicted RBP8.96□□□□□ -0.98
SF3B2-216ENST00000534765 TMEM39AQ9NV64 488 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 SCML2Q9UQR0 700 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 URB1O60287 2271 aaKnown RBP8.96□□□□□ -0.98
SF3B2-216ENST00000534765 HOXC11O43248 304 aaPredicted RBP8.96□□□□□ -0.98
SF3B2-216ENST00000534765 B4GAT1O43505 415 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 CPB1P15086 417 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 GJA1P17302 382 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 GTF2E2P29084 291 aaKnown RBP8.96□□□□□ -0.98
SF3B2-216ENST00000534765 COLEC12Q5KU26 742 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 ERAP2Q6P179 960 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 LYSMD3Q7Z3D4 306 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 C16orf62Q7Z3J2 963 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 LILRA2Q8N149 483 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 CLEC4FQ8N1N0 589 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 OR52K1Q8NGK4 314 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 ADAMTS19Q8TE59 1207 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 ZFP90Q8TF47 636 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 TFB1MQ8WVM0 346 aaKnown RBP8.96□□□□□ -0.98
SF3B2-216ENST00000534765 ATL1Q8WXF7 558 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 NTAN1Q96AB6 310 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 MSANTD3Q96H12 275 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 VPS39Q96JC1 886 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 KLHL5Q96PQ7 755 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 RANBP9Q96S59 729 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 CCDC106Q9BWC9 280 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 ATXN3LQ9H3M9 355 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 TLR9Q9NR96 1032 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 ANKRD36A6QL64 1941 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 A0A0D9SEW6 157 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 E9PAM4 449 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 NUAK1O60285 661 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 ALBP02768 609 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 GRIA3P42263 894 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 CHRNA4P43681 627 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 NME5P56597 212 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 KLF10Q13118 480 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 GPR17Q13304 367 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 IKBKEQ14164 716 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 NFE2Q16621 373 aaPredicted RBP8.95□□□□□ -0.98
SF3B2-216ENST00000534765 PITRM1Q5JRX3 1037 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 CERCAMQ5T4B2 595 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 KCTD11Q693B1 232 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 LYPD8Q6UX82 237 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 ABI1Q8IZP0 508 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 LGI2Q8N0V4 545 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 DHRSXQ8N5I4 330 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 CCNYL1Q8N7R7 359 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.95□□□□□ -0.98
SF3B2-216ENST00000534765 CDC26Q8NHZ8 85 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 JPH3Q8WXH2 748 aaPredicted RBP8.95□□□□□ -0.98
SF3B2-216ENST00000534765 ACDQ96AP0 544 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 NECTIN4Q96NY8 510 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 FAM193BQ96PV7 902 aaPredicted RBP8.95□□□□□ -0.98
SF3B2-216ENST00000534765 TTPALQ9BTX7 342 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 PIF1Q9H611 641 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 PLSCR3Q9NRY6 295 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 FARSBQ9NSD9 589 aaKnown RBP8.95□□□□□ -0.98
SF3B2-216ENST00000534765 FAM25AB3EWG3 89 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 FAM25CB3EWG5 89 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 FAM25GB3EWG6 89 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 H0Y626 953 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 ZW10O43264 779 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 PRKD3O94806 890 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 TGDSO95455 350 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 SYN1P17600 705 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 ARNTP27540 789 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 TTKP33981 857 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 ACVRL1P37023 503 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 GARSP41250 739 aaKnown RBP8.95□□□□□ -0.98
SF3B2-216ENST00000534765 MAGEA6P43360 314 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 TPI1P60174 286 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 MAXP61244 160 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 KBTBD6Q86V97 674 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 THEM5Q8N1Q8 247 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 UBE2J2Q8N2K1 259 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 AFAP1L2Q8N4X5 818 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 PROX1Q92786 737 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 SDCCAG3Q96C92 435 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 SEZ6LQ9BYH1 1024 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 HCFC2Q9Y5Z7 792 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.95□□□□□ -0.98
SF3B2-216ENST00000534765 FAM172BPA6NC97 362 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 EVPLLA8MZ36 301 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 SNAP91O60641 907 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 RFPL2O75678 378 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 PRKCGP05129 697 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 MGAT1P26572 445 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 DEFA1P59665 94 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 DEFA3P59666 94 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 GALNT2Q10471 571 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 TFDP2Q14188 446 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 GNA13Q14344 377 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 LSM12Q3MHD2 195 aaKnown RBP8.95□□□□□ -0.98
SF3B2-216ENST00000534765 EFHC2Q5JST6 749 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 HMBOX1Q6NT76 420 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 PLEKHG7Q6ZR37 379 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 VPS37AQ8NEZ2 397 aa8.95□□□□□ -0.98
SF3B2-216ENST00000534765 PTCD2Q8WV60 388 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms