RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.14■□□□□ 0.66
CAPN1-226ENST00000533820 FBXL8Q96CD0 374 aa19.14■□□□□ 0.66
CAPN1-226ENST00000533820 TLR6Q9Y2C9 796 aa19.14■□□□□ 0.66
CAPN1-226ENST00000533820 NDUFS3O75489 264 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 GGT5P36269 586 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 CAPGP40121 348 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 STC1P52823 247 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 NFKB2Q00653 900 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 TRAF2Q12933 501 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 SELPLGQ14242 412 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 CENPSQ8N2Z9 138 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 OR7D4Q8NG98 312 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 ZBED2Q9BTP6 218 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 POLR1EQ9GZS1 481 aaKnown RBP19.14■□□□□ 0.65
CAPN1-226ENST00000533820 PRDM5Q9NQX1 630 aaPredicted RBP19.14■□□□□ 0.65
CAPN1-226ENST00000533820 SACM1LQ9NTJ5 587 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 TBC1D23Q9NUY8 699 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 CD274Q9NZQ7 290 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 LOC285095A0A1B0GVY8 99 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 POLR2JP52435 117 aaKnown RBP19.14■□□□□ 0.65
CAPN1-226ENST00000533820 TUSC3Q13454 348 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 DCDC5Q6ZRR9 648 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 BPIFB6Q8NFQ5 453 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 ZFYVE28Q9HCC9 887 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 SLC52A3Q9NQ40 469 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 NOD1Q9Y239 953 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 LAMA3Q16787 3333 aa19.14■□□□□ 0.65
CAPN1-226ENST00000533820 PDE4DIPQ5VU43 2346 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 PIK3CGP48736 1102 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 PIGFQ07326 219 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 MAPRE1Q15691 268 aaKnown RBP19.13■□□□□ 0.65
CAPN1-226ENST00000533820 SETMARQ53H47 684 aaPredicted RBP19.13■□□□□ 0.65
CAPN1-226ENST00000533820 ANKRD34AQ69YU3 496 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 STK32CQ86UX6 486 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 MON1AQ86VX9 555 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 CLEC4FQ8N1N0 589 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 HIPK3Q9H422 1215 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 TAS2R13Q9NYV9 303 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 MED16Q9Y2X0 877 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 KCNH1O95259 989 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 PABPC1P11940 636 aaKnown RBP19.13■□□□□ 0.65
CAPN1-226ENST00000533820 RGRP47804 291 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 RAD51Q06609 339 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 PPP2R2DQ66LE6 453 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 ITIH5Q86UX2 942 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 LRRC49Q8IUZ0 686 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 HS3ST5Q8IZT8 346 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 FUBP1Q96AE4 644 aaKnown RBP19.13■□□□□ 0.65
CAPN1-226ENST00000533820 CGREF1Q99674 301 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 SEZ6LQ9BYH1 1024 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 ING2Q9H160 280 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 TMEM248Q9NWD8 314 aa19.13■□□□□ 0.65
CAPN1-226ENST00000533820 IFT80Q9P2H3 777 aaPredicted RBP19.13■□□□□ 0.65
CAPN1-226ENST00000533820 KERAO60938 352 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 HRH2P25021 359 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 PCYT1AP49585 367 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 LAPTM5Q13571 262 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 LDLRAP1Q5SW96 308 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 PACRGLQ8N7B6 248 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 EEF1AKMT1Q8WVE0 214 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 SLC39A13Q96H72 371 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 BIRC8Q96P09 236 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 TFB2MQ9H5Q4 396 aaKnown RBP19.12■□□□□ 0.65
CAPN1-226ENST00000533820 FANCEQ9HB96 536 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 MARCH2Q9P0N8 246 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 FNDC1Q4ZHG4 1894 aaPredicted RBP19.12■□□□□ 0.65
CAPN1-226ENST00000533820 SCAMP3O14828 347 aaKnown RBP19.12■□□□□ 0.65
CAPN1-226ENST00000533820 ALBP02768 609 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 CYP11A1P05108 521 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 TCF3P15923 654 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 HTR6P50406 440 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 SF3B4Q15427 424 aaKnown RBP eCLIP19.12■□□□□ 0.651e-7■■■■■ 31.6
CAPN1-226ENST00000533820 GPR162Q16538 588 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 GLYATQ6IB77 296 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 PIANPQ8IYJ0 282 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 ZNF683Q8IZ20 524 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 KIAA1191Q96A73 305 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 EHD1Q9H4M9 534 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 AIG1Q9NVV5 245 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 PKD2L2Q9NZM6 624 aa19.12■□□□□ 0.65
CAPN1-226ENST00000533820 TCRBV5S2A0A599 114 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 IQCA1LA6NCM1 817 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 M0QZQ0 153 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 TNPO2O14787 897 aaKnown RBP19.11■□□□□ 0.65
CAPN1-226ENST00000533820 GPR182O15218 404 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 RSL1D1O76021 490 aaKnown RBP19.11■□□□□ 0.65
CAPN1-226ENST00000533820 MATN4O95460 622 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 ZBTB11O95625 1053 aaPredicted RBP19.11■□□□□ 0.65
CAPN1-226ENST00000533820 CHEK2O96017 543 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 GPIP06744 558 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 SLC26A3P40879 764 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 OR1G1P47890 313 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 SERINC3Q13530 473 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 RCAN2Q14206 197 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 SPRED1Q7Z699 444 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 ALDH16A1Q8IZ83 802 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 ANKK1Q8NFD2 765 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 BRSK1Q8TDC3 778 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 FBXO32Q969P5 355 aa19.11■□□□□ 0.65
CAPN1-226ENST00000533820 MOSPD1Q9UJG1 213 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms