RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 CXorf40BQ96DE9 158 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 SPATA13Q96N96 652 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 TAAR9Q96RI9 348 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 DPYSL5Q9BPU6 564 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 GORASP1Q9BQQ3 440 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.28□□□□□ -0.76
CAPN1-225ENST00000533704 ZCCHC2Q9C0B9 1178 aaKnown RBP10.28□□□□□ -0.76
CAPN1-225ENST00000533704 OCIAD1Q9NX40 245 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 SLC39A1Q9NY26 324 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 IMPACTQ9P2X3 320 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 FAM8A1Q9UBU6 413 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 FKBPLQ9UIM3 349 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 EFR3BQ9Y2G0 817 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 AAR2Q9Y312 384 aaKnown RBP10.28□□□□□ -0.76
CAPN1-225ENST00000533704 KCTD3Q9Y597 815 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 PCDHB11Q9Y5F2 797 aa10.28□□□□□ -0.76
CAPN1-225ENST00000533704 PIEZO2Q9H5I5 2752 aa10.27□□□□□ -0.76
CAPN1-225ENST00000533704 OR2AG2A6NM03 316 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 OR52A4PA6NMU1 304 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 C2orf81A6NN90 581 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 PRAMEF1O95521 474 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 AMD1P17707 334 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 MSH3P20585 1137 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 LPOP22079 712 aaPredicted RBP10.27□□□□□ -0.77
CAPN1-225ENST00000533704 CDC25BP30305 580 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 CA5AP35218 305 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 SLC19A1P41440 591 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 CLCNKAP51800 687 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 CTSCP53634 463 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 UBE2IP63279 158 aaKnown RBP10.27□□□□□ -0.77
CAPN1-225ENST00000533704 TMPRSS15P98073 1019 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 RHDQ02161 417 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 ITGA9Q13797 1035 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 LDLRAP1Q5SW96 308 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 GPRC6AQ5T6X5 926 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 TMEM220Q6QAJ8 160 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 RASGEF1AQ8N9B8 481 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 FAM71DQ8N9W8 422 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 AVL9Q8NBF6 648 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 ZNF398Q8TD17 642 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 NAT14Q8WUY8 206 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 LRRC45Q96CN5 670 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 TBL1YQ9BQ87 522 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.27□□□□□ -0.77
CAPN1-225ENST00000533704 ZNF624Q9P2J8 865 aaPredicted RBP10.27□□□□□ -0.77
CAPN1-225ENST00000533704 PSMD13Q9UNM6 376 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 B3GALT1Q9Y5Z6 326 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 COL6A6A6NMZ7 2263 aa10.27□□□□□ -0.77
CAPN1-225ENST00000533704 TCRBV7S2A1N4TA0A589 114 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 MIF4GDA9UHW6 222 aaKnown RBP10.26□□□□□ -0.77
CAPN1-225ENST00000533704 STMND1H3BQB6 276 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 K7ENP7 123 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 ERVH48-1M5A8F1 160 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 CCL22O00626 93 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 DDX3YO15523 660 aaKnown RBP10.26□□□□□ -0.77
CAPN1-225ENST00000533704 PPFIA2O75334 1257 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 POP7O75817 140 aaKnown RBP10.26□□□□□ -0.77
CAPN1-225ENST00000533704 XRCC1P18887 633 aaPredicted RBP10.26□□□□□ -0.77
CAPN1-225ENST00000533704 ADRA1AP35348 466 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 HALP42357 657 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 EPHA4P54764 986 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 GFERP55789 205 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 SQSTM1Q13501 440 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 SEPT6Q14141 434 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 TAF1AQ15573 450 aaPredicted RBP10.26□□□□□ -0.77
CAPN1-225ENST00000533704 FNBP1LQ5T0N5 605 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 ANKS6Q68DC2 871 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 INO80CQ6PI98 192 aaPredicted RBP10.26□□□□□ -0.77
CAPN1-225ENST00000533704 WDR74Q6RFH5 385 aaPredicted RBP10.26□□□□□ -0.77
CAPN1-225ENST00000533704 RANBP10Q6VN20 620 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 TMEM26Q6ZUK4 368 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 AMZ2Q86W34 360 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 BEND7Q8N7W2 519 aaPredicted RBP10.26□□□□□ -0.77
CAPN1-225ENST00000533704 TTC13Q8NBP0 860 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 DDHD1Q8NEL9 900 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 OR13C4Q8NGS5 318 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 RNF31Q96EP0 1072 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 TGM7Q96PF1 710 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 CTRCQ99895 268 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 FAM96AQ9H5X1 160 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 ASB8Q9H765 288 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 CRLS1Q9UJA2 301 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 ACSL6Q9UKU0 697 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 GUCA1BQ9UMX6 200 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 WDR37Q9Y2I8 494 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 R3HDM2Q9Y2K5 976 aaKnown RBP10.26□□□□□ -0.77
CAPN1-225ENST00000533704 SLC30A1Q9Y6M5 507 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 CAPN6Q9Y6Q1 641 aa10.26□□□□□ -0.77
CAPN1-225ENST00000533704 C5orf60A6NFR6 353 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 LILRA5A6NI73 299 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 GAPDHSO14556 408 aaPredicted RBP10.25□□□□□ -0.77
CAPN1-225ENST00000533704 EFSO43281 561 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 RASSF9O75901 435 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 SRP72O76094 671 aaKnown RBP10.25□□□□□ -0.77
CAPN1-225ENST00000533704 UBXN7O94888 489 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 CRTAMO95727 393 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 BRAFP15056 766 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 TPH1P17752 444 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 CD82P27701 267 aa10.25□□□□□ -0.77
CAPN1-225ENST00000533704 SEPHS1P49903 392 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms