RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 IL1BP01584 269 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 CYP4F2P78329 520 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 CYP4F3Q08477 520 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 SEMA5AQ13591 1074 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 CCNIQ14094 377 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 EFR3AQ14156 821 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 C11orf91Q3C1V1 193 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 CCDC157Q569K6 752 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 GPR158Q5T848 1215 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 RHBDF2Q6PJF5 856 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 FAM131AQ6UXB0 335 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 ISLR2Q6UXK2 745 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 DEFB132Q7Z7B7 95 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 ZNF567Q8N184 647 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 UBR7Q8N806 425 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 C2orf15Q8WU43 125 aaKnown RBP6.95□□□□□ -1.3
CTNND1-236ENST00000533667 HAVCR1Q96D42 359 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 KLRG1Q96E93 195 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 APOLD1Q96LR9 279 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 LENG8Q96PV6 779 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-236ENST00000533667 ACAT2Q9BWD1 397 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 B3GNT5Q9BYG0 378 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 IPPKQ9H8X2 491 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 PHPT1Q9NRX4 125 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-236ENST00000533667 FKBP14Q9NWM8 211 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 RAB23Q9ULC3 237 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 SLC27A5Q9Y2P5 690 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 TLL2Q9Y6L7 1015 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 IGLV3-22A0A075B6J6 115 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 KCNU1A8MYU2 1149 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-236ENST00000533667 H3BM21 787 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 TNFRSF11BO00300 401 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 BTN3A3O00478 584 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 PIAS1O75925 651 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 C8GP07360 202 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 FAM163BP0C2L3 166 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 LAG3P18627 525 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 PTGER3P43115 390 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 ADAM17P78536 824 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 MBTD1Q05BQ5 628 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 TAF10Q12962 218 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 LARS2Q15031 903 aaKnown RBP6.95□□□□□ -1.3
CTNND1-236ENST00000533667 IL23RQ5VWK5 629 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 SMYD5Q6GMV2 418 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 FSTL4Q6MZW2 842 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 LLGL2Q6P1M3 1020 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 OTOP3Q7RTS5 596 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 RAB43Q86YS6 212 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 RFKQ969G6 155 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 EXOC2Q96KP1 924 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 TSSK3Q96PN8 268 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 GPR21Q99679 349 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 C1QTNF1Q9BXJ1 281 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 FGFBP2Q9BYJ0 223 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 CD320Q9NPF0 282 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 FNIP2Q9P278 1114 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.95□□□□□ -1.3
CTNND1-236ENST00000533667 STXBP5LQ9Y2K9 1186 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 A0A1B0GVM2 712 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 TCRBV7S2A1N4TA0A589 114 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 TCAF2A6NFQ2 919 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 STX16-NPEPL1H3BU86 382 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 AGPSO00116 658 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 STX16O14662 325 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 TSPAN1O60635 241 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 PRKACAP17612 351 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 STARP49675 285 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 IDH3AP50213 366 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 SRSF11Q05519 484 aaKnown RBP6.95□□□□□ -1.3
CTNND1-236ENST00000533667 RFTN1Q14699 578 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-236ENST00000533667 FAM110CQ1W6H9 321 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 LBX2Q6XYB7 198 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 SLC24A5Q71RS6 500 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 PPM1MQ96MI6 270 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 ZNF285Q96NJ3 590 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 GATA5Q9BWX5 397 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-236ENST00000533667 YTHDF1Q9BYJ9 559 aaKnown RBP6.95□□□□□ -1.3
CTNND1-236ENST00000533667 TMEM27Q9HBJ8 222 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 IL1RAPQ9NPH3 570 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 MRC1P22897 1456 aa6.95□□□□□ -1.3
CTNND1-236ENST00000533667 A0A0G2JPF8 293 aa6.94□□□□□ -1.3
CTNND1-236ENST00000533667 HNRNPCL3B7ZW38 293 aa6.94□□□□□ -1.3
CTNND1-236ENST00000533667 SLC30A4O14863 429 aa6.94□□□□□ -1.3
CTNND1-236ENST00000533667 FAM155BO75949 473 aa6.94□□□□□ -1.3
CTNND1-236ENST00000533667 FADS2O95864 444 aaKnown RBP6.94□□□□□ -1.3
CTNND1-236ENST00000533667 CST3P01034 146 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-236ENST00000533667 HNRNPCL4P0DMR1 293 aa6.94□□□□□ -1.3
CTNND1-236ENST00000533667 UNGP13051 313 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-236ENST00000533667 PRKACBP22694 351 aa6.94□□□□□ -1.3
CTNND1-236ENST00000533667 BRCC3P46736 316 aa6.94□□□□□ -1.3
CTNND1-236ENST00000533667 SLC9A3P48764 834 aa6.94□□□□□ -1.3
CTNND1-236ENST00000533667 ARFIP1P53367 373 aa6.94□□□□□ -1.3
CTNND1-236ENST00000533667 SLC5A3P53794 718 aa6.94□□□□□ -1.3
CTNND1-236ENST00000533667 AP3S2P59780 193 aa6.94□□□□□ -1.3
CTNND1-236ENST00000533667 GTF2H2Q13888 395 aa6.94□□□□□ -1.3
CTNND1-236ENST00000533667 TARBP2Q15633 366 aaKnown RBP6.94□□□□□ -1.3
CTNND1-236ENST00000533667 GTF2H2CQ6P1K8 395 aa6.94□□□□□ -1.3
CTNND1-236ENST00000533667 MED27Q6P2C8 311 aa6.94□□□□□ -1.3
CTNND1-236ENST00000533667 FBXO42Q6P3S6 717 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms