RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 CILP2Q8IUL8 1156 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 LMNTD2Q8IXW0 634 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 GPR150Q8NGU9 434 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 FBF1Q8TES7 1133 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 CDKL2Q92772 493 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 SGSM3Q96HU1 749 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 CCDC68Q9H2F9 335 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 OSGEPL1Q9H4B0 414 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 RMI1Q9H9A7 625 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 TMEM9BQ9NQ34 198 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 RXFP3Q9NSD7 469 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 KCNK6Q9Y257 313 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 PCYT1BQ9Y5K3 369 aaPredicted RBP17.22■□□□□ 0.35
NXF1-216ENST00000533499 CABIN1Q9Y6J0 2220 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 RIF1Q5UIP0 2472 aaKnown RBP17.22■□□□□ 0.35
NXF1-216ENST00000533499 KMOO15229 486 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 DFNA5O60443 496 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 SPAG6O75602 509 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 PIAS2O75928 621 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 TRIM16O95361 564 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 CELA2BP08218 269 aaPredicted RBP17.21■□□□□ 0.35
NXF1-216ENST00000533499 OR56A5P0C7T3 313 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 AK4P27144 223 aaPredicted RBP17.21■□□□□ 0.35
NXF1-216ENST00000533499 ABCG1P45844 678 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 PMS2P54278 862 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 ILF3Q12906 894 aaKnown RBP eCLIP17.21■□□□□ 0.35
NXF1-216ENST00000533499 CBLBQ13191 982 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 ZNF789Q5FWF6 425 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 UBAP2Q5T6F2 1119 aaKnown RBP17.21■□□□□ 0.35
NXF1-216ENST00000533499 SLC30A9Q6PML9 568 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 KIAA2013Q8IYS2 634 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 PPM1NQ8N819 430 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 EIF1ADQ8N9N8 165 aaKnown RBP17.21■□□□□ 0.35
NXF1-216ENST00000533499 ZNF548Q8NEK5 533 aaPredicted RBP17.21■□□□□ 0.35
NXF1-216ENST00000533499 CCL4L1Q8NHW4 92 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 ATXN7L3BQ96GX2 97 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 TCF12Q99081 682 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 LRRC61Q9BV99 259 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 KLC4Q9NSK0 619 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 UCKL1Q9NWZ5 548 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 TXNDC16Q9P2K2 825 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 VPS9D1Q9Y2B5 631 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 DGKBQ9Y6T7 804 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 LRP4O75096 1905 aa17.21■□□□□ 0.35
NXF1-216ENST00000533499 C4orf47A7E2U8 309 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 GPR89AB7ZAQ6 455 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 F8W8V4 182 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 PRMT5O14744 637 aaPredicted RBP17.2■□□□□ 0.34
NXF1-216ENST00000533499 AQP9O43315 295 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 GDF9O60383 454 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 SNX2O60749 519 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 POP7O75817 140 aaKnown RBP17.2■□□□□ 0.34
NXF1-216ENST00000533499 S1PR4O95977 384 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 ANXA6P08133 673 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 GPR89BP0CG08 455 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 VCLP18206 1134 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 EPHA8P29322 1005 aaPredicted RBP17.2■□□□□ 0.34
NXF1-216ENST00000533499 ACTR1BP42025 376 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 CSE1LP55060 971 aaKnown RBP17.2■□□□□ 0.34
NXF1-216ENST00000533499 ACTR1AP61163 376 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 CTBSQ01459 385 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 ELOCQ15369 112 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 SHBQ15464 509 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 UAP1Q16222 522 aaPredicted RBP17.2■□□□□ 0.34
NXF1-216ENST00000533499 TYSND1Q2T9J0 566 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 TEDDM1Q5T9Z0 273 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 WDR93Q6P2C0 686 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 UBLCP1Q8WVY7 318 aaPredicted RBP17.2■□□□□ 0.34
NXF1-216ENST00000533499 FAM136AQ96C01 138 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 ZNF514Q96K75 400 aaPredicted RBP17.2■□□□□ 0.34
NXF1-216ENST00000533499 GSDMCQ9BYG8 508 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 SARS2Q9NP81 518 aaKnown RBP17.2■□□□□ 0.34
NXF1-216ENST00000533499 MOCS1Q9NZB8 636 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 GNPTGQ9UJJ9 305 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 PIKFYVEQ9Y2I7 2098 aa17.2■□□□□ 0.34
NXF1-216ENST00000533499 IGLV3-16A0A075B6K0 115 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.19■□□□□ 0.34
NXF1-216ENST00000533499 CHUKO15111 745 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 YKT6O15498 198 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 FOXD2O60548 495 aaPredicted RBP17.19■□□□□ 0.34
NXF1-216ENST00000533499 HAUS5O94927 633 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 TGM1P22735 817 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 DGKAP23743 735 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 RXRGP48443 463 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 FRG1Q14331 258 aaKnown RBP17.19■□□□□ 0.34
NXF1-216ENST00000533499 SUZ12Q15022 739 aaKnown RBP17.19■□□□□ 0.34
NXF1-216ENST00000533499 EFTUD2Q15029 972 aaKnown RBP eCLIP17.19■□□□□ 0.34
NXF1-216ENST00000533499 BRD3Q15059 726 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 DEFB133Q30KQ1 61 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 KBTBD12Q3ZCT8 623 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 CNSTQ6PJW8 725 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 PACS1Q6VY07 963 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 TRMT10CQ7L0Y3 403 aaKnown RBP17.19■□□□□ 0.34
NXF1-216ENST00000533499 STRA8Q7Z7C7 330 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 AMZ2Q86W34 360 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 GKN2Q86XP6 184 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 RELL1Q8IUW5 271 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 ZNF547Q8IVP9 402 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 KRT222Q8N1A0 295 aa17.19■□□□□ 0.34
NXF1-216ENST00000533499 FSTL5Q8N475 847 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms