RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 VPS4BO75351 444 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 F2P00734 622 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 EPORP19235 508 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 GLUD2P49448 558 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 RPS7P62081 194 aaKnown RBP12.13□□□□□ -0.47
BDNF-218ENST00000533246 ECT2LQ008S8 904 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 FAM187BQ17R55 369 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 ZNF792Q3KQV3 632 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 SNAP47Q5SQN1 464 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 GLYATQ6IB77 296 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 GALNT7Q86SF2 657 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 HJURPQ8NCD3 748 aaPredicted RBP12.13□□□□□ -0.47
BDNF-218ENST00000533246 SPOCK3Q9BQ16 436 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 TRMOQ9BU70 441 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 GALPQ9UBC7 116 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 CPQQ9Y646 472 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 TRAV19A0A0A6YYK7 116 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 MTX2O75431 263 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 RFPL1O75677 317 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 ZBTB48P10074 688 aaPredicted RBP12.13□□□□□ -0.47
BDNF-218ENST00000533246 COL6A2P12110 1019 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 SIM2Q14190 667 aaPredicted RBP12.13□□□□□ -0.47
BDNF-218ENST00000533246 ZC3HC1Q86WB0 502 aaKnown RBP12.13□□□□□ -0.47
BDNF-218ENST00000533246 RBFAQ8N0V3 343 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 CPSF7Q8N684 471 aaKnown RBP12.13□□□□□ -0.47
BDNF-218ENST00000533246 DPF3Q92784 378 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 RHBGQ9H310 441 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 DUSP12Q9UNI6 340 aa12.13□□□□□ -0.47
BDNF-218ENST00000533246 PTPRZ1P23471 2315 aaPredicted RBP12.13□□□□□ -0.47
BDNF-218ENST00000533246 FUOMA2VDF0 154 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 RNASEH1O60930 286 aaKnown RBP12.12□□□□□ -0.47
BDNF-218ENST00000533246 SELPP16109 830 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 GRK3P35626 688 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 PARP15Q460N3 678 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 UBE2R2Q712K3 238 aaPredicted RBP12.12□□□□□ -0.47
BDNF-218ENST00000533246 GPRIN1Q7Z2K8 1008 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 GALNT5Q7Z7M9 940 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 ZNF280BQ86YH2 543 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 UBR7Q8N806 425 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 ACTRT2Q8TDY3 377 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 MYO19Q96H55 970 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 PPP3R2Q96LZ3 170 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 VPS35Q96QK1 796 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 REEP1Q9H902 201 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 PDLIM7Q9NR12 457 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 ZNF490Q9ULM2 529 aaPredicted RBP12.12□□□□□ -0.47
BDNF-218ENST00000533246 RPL26L1Q9UNX3 145 aaKnown RBP12.12□□□□□ -0.47
BDNF-218ENST00000533246 MYH3P11055 1940 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 J3QRK9 145 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 NADK2Q4G0N4 442 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 PLEKHG4Q58EX7 1191 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 PLPP4Q5VZY2 271 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 AKAP14Q86UN6 197 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 CENPSQ8N2Z9 138 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 ZNF366Q8N895 744 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 FBXO22Q8NEZ5 403 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 OR2T12Q8NG77 320 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 STYXQ8WUJ0 223 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 BTN2A2Q8WVV5 523 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 SUSD6Q92537 303 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 FBXL8Q96CD0 374 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 TCF12Q99081 682 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 ZSCAN5AQ9BUG6 496 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 CNTN3Q9P232 1028 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 HS3ST4Q9Y661 456 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.12□□□□□ -0.47
BDNF-218ENST00000533246 ANKDD1BA6NHY2 528 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 SETD1AO15047 1707 aaKnown RBP12.12□□□□□ -0.47
BDNF-218ENST00000533246 INSIG1O15503 277 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 DLDP09622 509 aaKnown RBP12.12□□□□□ -0.47
BDNF-218ENST00000533246 CHRNB1P11230 501 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 HOXA11P31270 313 aaPredicted RBP12.12□□□□□ -0.47
BDNF-218ENST00000533246 CASP9P55211 416 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 ACTR3P61158 418 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 TP53BP2Q13625 1128 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 ZNF598Q86UK7 904 aaKnown RBP12.12□□□□□ -0.47
BDNF-218ENST00000533246 BPHLQ86WA6 291 aaPredicted RBP12.12□□□□□ -0.47
BDNF-218ENST00000533246 CCDC28AQ8IWP9 274 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 C8orf59Q8N0T1 100 aaPredicted RBP12.12□□□□□ -0.47
BDNF-218ENST00000533246 PGAM4Q8N0Y7 254 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 IRGQQ8WZA9 623 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 FCRL5Q96RD9 977 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 RASSF1Q9NS23 344 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 DNAJC28Q9NX36 388 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 COQ3Q9NZJ6 369 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 ADGRE2Q9UHX3 823 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 SNX6Q9UNH7 406 aa12.12□□□□□ -0.47
BDNF-218ENST00000533246 A0A0U1RQF3 1178 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 SH3PXD2BA1X283 911 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 CENPXA8MT69 81 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 ERAL1O75616 437 aaKnown RBP12.11□□□□□ -0.47
BDNF-218ENST00000533246 CDK14O94921 469 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 ALDOAP04075 364 aaKnown RBP12.11□□□□□ -0.47
BDNF-218ENST00000533246 ALPIP09923 528 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 CTNNB1P35222 781 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 GPR1P46091 355 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 GATMP50440 423 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 AFF1P51825 1210 aaKnown RBP12.11□□□□□ -0.47
BDNF-218ENST00000533246 ACLYP53396 1101 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 HMGCS1Q01581 520 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms