RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 CPZQ66K79 652 aa11.34□□□□□ -0.59
CMTM1-216ENST00000533078 PWWP2BQ6NUJ5 590 aa11.34□□□□□ -0.59
CMTM1-216ENST00000533078 ARMC6Q6NXE6 501 aa11.34□□□□□ -0.59
CMTM1-216ENST00000533078 ZNF571Q7Z3V5 609 aaPredicted RBP11.34□□□□□ -0.59
CMTM1-216ENST00000533078 ADGRG6Q86SQ4 1221 aa11.34□□□□□ -0.59
CMTM1-216ENST00000533078 RHOT1Q8IXI2 618 aa11.34□□□□□ -0.59
CMTM1-216ENST00000533078 NIPA2Q8N8Q9 360 aa11.34□□□□□ -0.59
CMTM1-216ENST00000533078 KCTD6Q8NC69 237 aa11.34□□□□□ -0.59
CMTM1-216ENST00000533078 OR8K5Q8NH50 307 aa11.34□□□□□ -0.59
CMTM1-216ENST00000533078 PRR7Q8TB68 274 aa11.34□□□□□ -0.59
CMTM1-216ENST00000533078 MR1Q95460 341 aa11.34□□□□□ -0.59
CMTM1-216ENST00000533078 TSGA13Q96PP4 275 aa11.34□□□□□ -0.59
CMTM1-216ENST00000533078 CD180Q99467 661 aa11.34□□□□□ -0.59
CMTM1-216ENST00000533078 ZNF670Q9BS34 389 aa11.34□□□□□ -0.59
CMTM1-216ENST00000533078 FGF21Q9NSA1 209 aa11.34□□□□□ -0.59
CMTM1-216ENST00000533078 TRIM10Q9UDY6 481 aa11.34□□□□□ -0.59
CMTM1-216ENST00000533078 SNX7Q9UNH6 387 aa11.34□□□□□ -0.59
CMTM1-216ENST00000533078 TNRC6AQ8NDV7 1962 aaKnown RBP11.34□□□□□ -0.59
CMTM1-216ENST00000533078 TLCD2A6NGC4 264 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 MAP3K7O43318 606 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 SEMA7AO75326 666 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 SCRG1O75711 98 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 SORBS2O94875 1100 aaKnown RBP11.33□□□□□ -0.6
CMTM1-216ENST00000533078 PRLP01236 227 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 JCHAINP01591 159 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 TCF4P15884 667 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 LPOP22079 712 aaPredicted RBP11.33□□□□□ -0.6
CMTM1-216ENST00000533078 FECHP22830 423 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 GJC1P36383 396 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 PRKCIP41743 596 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 DRG2P55039 364 aaKnown RBP11.33□□□□□ -0.6
CMTM1-216ENST00000533078 RRADP55042 308 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 RPS18P62269 152 aaKnown RBP11.33□□□□□ -0.6
CMTM1-216ENST00000533078 TUBB4BP68371 445 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 HSD11B2P80365 405 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 SLC25A11Q02978 314 aaKnown RBP11.33□□□□□ -0.6
CMTM1-216ENST00000533078 MMRN1Q13201 1228 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 TUBB2AQ13885 445 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 ELOAQ14241 798 aaKnown RBP11.33□□□□□ -0.6
CMTM1-216ENST00000533078 GALNT3Q14435 633 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 PDK2Q15119 407 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 EIF2S3LQ2VIR3 472 aaKnown RBP11.33□□□□□ -0.6
CMTM1-216ENST00000533078 ZNF648Q5T619 568 aaPredicted RBP11.33□□□□□ -0.6
CMTM1-216ENST00000533078 NCBP2-AS2Q69YL0 99 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 TTC30BQ8N4P2 665 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 ARRDC2Q8TBH0 407 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 BRSK1Q8TDC3 778 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 SLC41A2Q96JW4 573 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 TUBB2BQ9BVA1 445 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 XPO4Q9C0E2 1151 aaKnown RBP11.33□□□□□ -0.6
CMTM1-216ENST00000533078 SLC7A5P2Q9GIP4 190 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 NAT10Q9H0A0 1025 aaKnown RBP11.33□□□□□ -0.6
CMTM1-216ENST00000533078 MAGEE1Q9HCI5 957 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 AIPL1Q9NZN9 384 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 NFKBIL1Q9UBC1 381 aaPredicted RBP11.33□□□□□ -0.6
CMTM1-216ENST00000533078 SLC23A2Q9UGH3 650 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 SHOC2Q9UQ13 582 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 ADGRG1Q9Y653 693 aa11.33□□□□□ -0.6
CMTM1-216ENST00000533078 IGHV5-51A0A0C4DH38 117 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 SSU72P8A0A1W2PR75 194 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 DDX3XO00571 662 aaKnown RBP eCLIP11.32□□□□□ -0.6
CMTM1-216ENST00000533078 KLHL41O60662 606 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 TIAF1O95411 115 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 ZBTB11O95625 1053 aaPredicted RBP11.32□□□□□ -0.6
CMTM1-216ENST00000533078 EBLN1P0CF75 366 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 FOLR1P15328 257 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 IL4RP24394 825 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 NIPAL4Q0D2K0 466 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 DPYSL3Q14195 570 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 KCNAB1Q14722 419 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 PAPD7Q5XG87 772 aaKnown RBP11.32□□□□□ -0.6
CMTM1-216ENST00000533078 JMJD6Q6NYC1 403 aaPredicted RBP11.32□□□□□ -0.6
CMTM1-216ENST00000533078 FAM199XQ6PEV8 388 aaPredicted RBP11.32□□□□□ -0.6
CMTM1-216ENST00000533078 AMZ2Q86W34 360 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 OOSP2Q86WS3 158 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 GPR26Q8NDV2 337 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 CPT1BQ92523 772 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 PNPLA2Q96AD5 504 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 HDAC11Q96DB2 347 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 C5orf34Q96MH7 638 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 ISCUQ9H1K1 167 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 CBX8Q9HC52 389 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 KCND1Q9NSA2 647 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 SOHLH2Q9NX45 425 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 GPR83Q9NYM4 423 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 ZNF711Q9Y462 761 aa11.32□□□□□ -0.6
CMTM1-216ENST00000533078 BZW2Q9Y6E2 419 aaKnown RBP11.32□□□□□ -0.6
CMTM1-216ENST00000533078 TCP11X1B4DZS4 312 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 MTX2O75431 263 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 TMEM63AO94886 807 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 CD48P09326 243 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 BRAFP15056 766 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 PTGIRP43119 386 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 TMEM115Q12893 351 aaPredicted RBP11.31□□□□□ -0.6
CMTM1-216ENST00000533078 PRKAA1Q13131 559 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 MRPL49Q13405 166 aaKnown RBP11.31□□□□□ -0.6
CMTM1-216ENST00000533078 XRCC4Q13426 336 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 IL10RAQ13651 578 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 IZUMO3Q5VZ72 239 aa11.31□□□□□ -0.6
CMTM1-216ENST00000533078 ZDHHC20Q5W0Z9 365 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms