RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 SNX20Q7Z614 316 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 PIM3Q86V86 326 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 ZNF761Q86XN6 746 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-210ENST00000532935 SLITRK4Q8IW52 837 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 RASGEF1CQ8N431 466 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 PRELID2Q8N945 189 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 AVL9Q8NBF6 648 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 STYXQ8WUJ0 223 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 FGF11Q92914 225 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 PRR11Q96HE9 360 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-210ENST00000532935 ZNF514Q96K75 400 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-210ENST00000532935 ZNF578Q96N58 590 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-210ENST00000532935 NUDT22Q9BRQ3 303 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 FAM96AQ9H5X1 160 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 ASCL3Q9NQ33 180 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 TRMT1Q9NXH9 659 aaKnown RBP15.12■□□□□ 0.01
CPSF1-210ENST00000532935 SCHIP1Q9P0W5 487 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-210ENST00000532935 CPNE7Q9UBL6 633 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 CRLS1Q9UJA2 301 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 PCDHGA8Q9Y5G5 932 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 DNMT3AQ9Y6K1 912 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-210ENST00000532935 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.12■□□□□ 0.01
CPSF1-210ENST00000532935 SLC30A1Q9Y6M5 507 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 CHD6Q8TD26 2715 aa15.12■□□□□ 0.01
CPSF1-210ENST00000532935 MROH6A6NGR9 719 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 PDZK1P1A8MUH7 402 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 KCNJ13O60928 360 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 POP7O75817 140 aaKnown RBP15.11■□□□□ 0.01
CPSF1-210ENST00000532935 GAS8O95995 478 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 APRTP07741 180 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 IDSP22304 550 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 RPL10P27635 214 aaKnown RBP15.11■□□□□ 0.01
CPSF1-210ENST00000532935 RBMS1P29558 406 aaKnown RBP15.11■□□□□ 0.01
CPSF1-210ENST00000532935 GRIA1P42261 906 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 UBE2IP63279 158 aaKnown RBP15.11■□□□□ 0.01
CPSF1-210ENST00000532935 GPLD1P80108 840 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 DMPKQ09013 629 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 EIF3IQ13347 325 aaKnown RBP15.11■□□□□ 0.01
CPSF1-210ENST00000532935 SQSTM1Q13501 440 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 CCDC38Q502W7 563 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 FNBP1LQ5T0N5 605 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 PHF19Q5T6S3 580 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 AGAP9Q5VTM2 703 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 FOXR1Q6PIV2 292 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 IGF2-ASQ6U949 168 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 ABRAXAS1Q6UWZ7 409 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 C4orf22Q6V702 233 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 WASH2PQ6VEQ5 465 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 DET1Q7L5Y6 550 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 RAB11FIP2Q7L804 512 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 AMZ2Q86W34 360 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 NXPE1Q8N323 547 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 SNIP1Q8TAD8 396 aaKnown RBP15.11■□□□□ 0.01
CPSF1-210ENST00000532935 SH3KBP1Q96B97 665 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 SGF29Q96ES7 293 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 CDKN2AIPNLQ96HQ2 116 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 MS4A14Q96JA4 679 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 SEMA6CQ9H3T2 930 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 CASS4Q9NQ75 786 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 WASH6PQ9NQA3 447 aa15.11■□□□□ 0.01
CPSF1-210ENST00000532935 CCDC78A2IDD5 438 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 PLD2O14939 933 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 KIF5CO60282 957 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 ZNF500O60304 480 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-210ENST00000532935 RALBP11234 206 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 BRAFP15056 766 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 XRCC1P18887 633 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-210ENST00000532935 PSMA3P25788 255 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 PBLDP30039 288 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-210ENST00000532935 CSF2RBP32927 897 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 DRG2P55039 364 aaKnown RBP15.1■□□□□ 0.01
CPSF1-210ENST00000532935 ERVPABLB-1P60509 514 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 LAMB3Q13751 1172 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 SKIDA1Q1XH10 827 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 GPR33Q49SQ1 333 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 ZRANB3Q5FWF4 1079 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 ZNF574Q6ZN55 896 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-210ENST00000532935 MICALCLQ6ZW33 695 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 FBXO39Q8N4B4 442 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 BEND7Q8N7W2 519 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-210ENST00000532935 OR10G6Q8NH81 332 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 NAT14Q8WUY8 206 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 HEXDCQ8WVB3 486 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 DCUN1D1Q96GG9 259 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 AHCYL2Q96HN2 611 aaKnown RBP15.1■□□□□ 0.01
CPSF1-210ENST00000532935 SLC46A1Q96NT5 459 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 DCBLD2Q96PD2 775 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 COPS8Q99627 209 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 DPYSL5Q9BPU6 564 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 EIF2B3Q9NR50 452 aaKnown RBP15.1■□□□□ 0.01
CPSF1-210ENST00000532935 THSD1Q9NS62 852 aa15.1■□□□□ 0.01
CPSF1-210ENST00000532935 ZNF624Q9P2J8 865 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-210ENST00000532935 TTC7AQ9ULT0 858 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-210ENST00000532935 A0A087WV48 116 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 TRBV5-4A0A0C4DH59 114 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 IGHV5-10-1A0A0J9YXX1 117 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 HEATR9A2RTY3 570 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 SGTAO43765 313 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 DUX1O43812 170 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 TNFSF15O95150 251 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms