RNA–Protein interactions for RNA: ENST00000532451.1

SORL1-210, Transcript of sortilin related receptor 1, humanhuman

TSL 1 (best)

Gene SORL1, Length 2,165 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-210ENST00000532451 HMBOX1Q6NT76 420 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 ITIH5Q86UX2 942 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 TRIM54Q9BYV2 358 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 NOL11Q9H8H0 719 aaKnown RBP23.28■■□□□ 1.32
SORL1-210ENST00000532451 ARMC1Q9NVT9 282 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 TSR3Q9UJK0 312 aaKnown RBP23.28■■□□□ 1.32
SORL1-210ENST00000532451 PCDHGB4Q9UN71 923 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 PCDHGB5Q9Y5G0 923 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 SLC22A3O75751 556 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 TRBC1P01850 177 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 SPATS1Q496A3 300 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 LETMD1Q6P1Q0 360 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 SBSNQ6UWP8 590 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 SLC39A5Q6ZMH5 540 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 DCBLD1Q8N8Z6 715 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 DDI1Q8WTU0 396 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 CANT1Q8WVQ1 401 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 ZNF689Q96CS4 500 aaPredicted RBP23.27■■□□□ 1.32
SORL1-210ENST00000532451 CDK15Q96Q40 435 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 BOCQ9BWV1 1114 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 CIPCQ9C0C6 399 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 MRPL17Q9NRX2 175 aaKnown RBP23.27■■□□□ 1.32
SORL1-210ENST00000532451 LSM7Q9UK45 103 aaKnown RBP23.27■■□□□ 1.32
SORL1-210ENST00000532451 OGDHLQ9ULD0 1010 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 TRIM17Q9Y577 477 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 PCDHA9Q9Y5H5 950 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 TNPO3Q9Y5L0 923 aaKnown RBP23.27■■□□□ 1.32
SORL1-210ENST00000532451 AK5Q9Y6K8 562 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 C1orf232A0A0U1RR37 186 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 ASPDHA6ND91 283 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 AQP12BA6NM10 295 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 HTRA2O43464 458 aaPredicted RBP23.27■■□□□ 1.32
SORL1-210ENST00000532451 CA5AP35218 305 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 CLCN2P51788 898 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 UFM1P61960 85 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 TLE2Q04725 743 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 NFYCQ13952 458 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 FAM117BQ6P1L5 589 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 SNX20Q7Z614 316 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 TMCO2Q7Z6W1 182 aaPredicted RBP23.27■■□□□ 1.32
SORL1-210ENST00000532451 AMIGO2Q86SJ2 522 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 AQP12AQ8IXF9 295 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 RBFAQ8N0V3 343 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 AHI1Q8N157 1196 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 VPS33AQ96AX1 596 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 ZNF597Q96LX8 424 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 C1orf50Q9BV19 199 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 ASB8Q9H765 288 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 GNPTGQ9UJJ9 305 aa23.27■■□□□ 1.32
SORL1-210ENST00000532451 EEDO75530 441 aaKnown RBP23.26■■□□□ 1.31
SORL1-210ENST00000532451 S100BP04271 92 aaPredicted RBP23.26■■□□□ 1.31
SORL1-210ENST00000532451 YBX1P67809 324 aaKnown RBP23.26■■□□□ 1.31
SORL1-210ENST00000532451 GK3PQ14409 553 aa23.26■■□□□ 1.31
SORL1-210ENST00000532451 NRF1Q16656 503 aa23.26■■□□□ 1.31
SORL1-210ENST00000532451 C18orf21Q32NC0 220 aaPredicted RBP23.26■■□□□ 1.31
SORL1-210ENST00000532451 C6orf136Q5SQH8 315 aa23.26■■□□□ 1.31
SORL1-210ENST00000532451 GOLGA7Q7Z5G4 137 aa23.26■■□□□ 1.31
SORL1-210ENST00000532451 DDX53Q86TM3 631 aaKnown RBP23.26■■□□□ 1.31
SORL1-210ENST00000532451 ACDQ96AP0 544 aa23.26■■□□□ 1.31
SORL1-210ENST00000532451 VWCEQ96DN2 955 aa23.26■■□□□ 1.31
SORL1-210ENST00000532451 SPATA16Q9BXB7 569 aa23.26■■□□□ 1.31
SORL1-210ENST00000532451 SLC2A11Q9BYW1 496 aa23.26■■□□□ 1.31
SORL1-210ENST00000532451 SPG21Q9NZD8 308 aa23.26■■□□□ 1.31
SORL1-210ENST00000532451 ZIM2Q9NZV7 527 aa23.26■■□□□ 1.31
SORL1-210ENST00000532451 C7orf72A4D263 438 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 TIPRLO75663 272 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 BAIAP3O94812 1187 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 PABPC4LP0CB38 370 aaKnown RBP23.25■■□□□ 1.31
SORL1-210ENST00000532451 BMP1P13497 986 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 ITGALP20701 1170 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 GKP32189 559 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 CSNK1DP48730 415 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 APLP1P51693 650 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 CYP4F8P98187 520 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 NFATC2Q13469 925 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 TRIM60Q495X7 471 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 LCN8Q6JVE9 175 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 PAF1Q8N7H5 531 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 FNDC5Q8NAU1 212 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 TMEM125Q96AQ2 219 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 PPWD1Q96BP3 646 aaKnown RBP23.25■■□□□ 1.31
SORL1-210ENST00000532451 C19orf43Q9BQ61 176 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 CCM2LQ9NUG4 571 aaPredicted RBP23.25■■□□□ 1.31
SORL1-210ENST00000532451 ACTR3BQ9P1U1 418 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 EGFL7Q9UHF1 273 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 APPL1Q9UKG1 709 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 ST14Q9Y5Y6 855 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 CCDC154A6NI56 674 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 RAD51BO15315 384 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 FFAR2O15552 330 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 SYNCRIPO60506 623 aaKnown RBP23.25■■□□□ 1.31
SORL1-210ENST00000532451 SOCS5O75159 536 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 TNFAIP8O95379 198 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 ITGB6P18564 788 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 MAPK8P45983 427 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 POLR2JP52435 117 aaKnown RBP23.25■■□□□ 1.31
SORL1-210ENST00000532451 MYBPC1Q00872 1141 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 CDKN3Q16667 212 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 ATP6AP1LQ52LC2 224 aa23.25■■□□□ 1.31
SORL1-210ENST00000532451 PAGE3Q5JUK9 113 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms