RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 RCOR2Q8IZ40 523 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 SLC25A41Q8N5S1 370 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 GDAP1Q8TB36 358 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 BRSK1Q8TDC3 778 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 HAUS1Q96CS2 278 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 QKIQ96PU8 341 aaKnown RBP eCLIP16.54■□□□□ 0.24
CPSF1-207ENST00000531727 EFHD1Q9BUP0 239 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 TRIT1Q9H3H1 467 aaKnown RBP16.54■□□□□ 0.24
CPSF1-207ENST00000531727 SLC40A1Q9NP59 571 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.54■□□□□ 0.24
CPSF1-207ENST00000531727 IL17CQ9P0M4 197 aa16.54■□□□□ 0.24
CPSF1-207ENST00000531727 OR52A4PA6NMU1 304 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 HACD1B0YJ81 288 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 F5H423 210 aaPredicted RBP16.53■□□□□ 0.24
CPSF1-207ENST00000531727 KCNJ13O60928 360 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 WISP1O95388 367 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 LCA5LO95447 670 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 DLGAP3O95886 979 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 HLA-DPA1P20036 260 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 MARCKSL1P49006 195 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 DRG2P55039 364 aaKnown RBP16.53■□□□□ 0.24
CPSF1-207ENST00000531727 NFKB2Q00653 900 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 MPP3Q13368 585 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 C11orf63Q6NUN7 778 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 CCDC50Q8IVM0 306 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 TC2NQ8N9U0 490 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 BLOC1S5Q8TDH9 187 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 CXorf40BQ96DE9 158 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 RBM41Q96IZ5 413 aaKnown RBP16.53■□□□□ 0.24
CPSF1-207ENST00000531727 TTC25Q96NG3 672 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 CATSPER2Q96P56 530 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 TGM7Q96PF1 710 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 ZCCHC2Q9C0B9 1178 aaKnown RBP16.53■□□□□ 0.24
CPSF1-207ENST00000531727 SLC25A18Q9H1K4 315 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 ZNF768Q9H5H4 540 aaKnown RBP16.53■□□□□ 0.24
CPSF1-207ENST00000531727 CLMPQ9H6B4 373 aa16.53■□□□□ 0.24
CPSF1-207ENST00000531727 ASH1LQ9NR48 2969 aaKnown RBP16.52■□□□□ 0.24
CPSF1-207ENST00000531727 SUV39H1O43463 412 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 HALP42357 657 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 CAPZBP47756 277 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 LEPRP48357 1165 aaKnown RBP16.52■□□□□ 0.24
CPSF1-207ENST00000531727 POLE2P56282 527 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 KCNC4Q03721 635 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 FOXM1Q08050 763 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 DMPKQ09013 629 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 MAP7Q14244 749 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 GPR18Q14330 331 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 CHRNA6Q15825 494 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 PPP2R5EQ16537 467 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 LDLRAP1Q5SW96 308 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 FAM151BQ6UXP7 276 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 ATG14Q6ZNE5 492 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 GLT6D1Q7Z4J2 308 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 UNC5BQ8IZJ1 945 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 IPMKQ8NFU5 416 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 RSC1A1Q92681 617 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 TRIM10Q9UDY6 481 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 RSPH14Q9UHP6 348 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 TRHDEQ9UKU6 1024 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 TFR2Q9UP52 801 aa16.52■□□□□ 0.24
CPSF1-207ENST00000531727 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.52■□□□□ 0.24
CPSF1-207ENST00000531727 GLYATL1P3A0A0U1RQE8 302 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 TERTO14746 1132 aaKnown RBP16.51■□□□□ 0.23
CPSF1-207ENST00000531727 NKX2-8O15522 239 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 GPR39O43194 453 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 UGT1A9O60656 530 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 UGT1A6P19224 532 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 UGT1A1P22309 533 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 UGT1A4P22310 534 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 STAT5AP42229 794 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 CCR10P46092 362 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 SEPHS1P49903 392 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 KCNAB2Q13303 367 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 XRCC4Q13426 336 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 ITGA9Q13797 1035 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 SARM1Q6SZW1 724 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 BBS12Q6ZW61 710 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 PRSS42Q7Z5A4 293 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 AMZ2Q86W34 360 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 CCDC170Q8IYT3 715 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 ESX1Q8N693 406 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 RASGEF1AQ8N9B8 481 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 DDHD1Q8NEL9 900 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 KRT35Q92764 455 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 ZDHHC12Q96GR4 267 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 FSD1LQ9BXM9 530 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 ULBP3Q9BZM4 244 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 UGT1A7Q9HAW7 530 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 UGT1A10Q9HAW8 530 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 UGT1A8Q9HAW9 530 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 EPHA6Q9UF33 1036 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 TUBD1Q9UJT1 453 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 WDR37Q9Y2I8 494 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 PKP3Q9Y446 797 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 PCDHA13Q9Y5I0 950 aa16.51■□□□□ 0.23
CPSF1-207ENST00000531727 APOC4-APOC2K7ER74 178 aa16.5■□□□□ 0.23
CPSF1-207ENST00000531727 GAPDHSO14556 408 aaPredicted RBP16.5■□□□□ 0.23
CPSF1-207ENST00000531727 BUD23O43709 281 aaKnown RBP16.5■□□□□ 0.23
CPSF1-207ENST00000531727 POP7O75817 140 aaKnown RBP16.5■□□□□ 0.23
CPSF1-207ENST00000531727 RASSF9O75901 435 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms