RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 SLC18A3Q16572 532 aa15.54■□□□□ 0.08
CHMP4A-204ENST00000530996 KHDC1Q4VXA5 237 aaKnown RBP15.54■□□□□ 0.08
CHMP4A-204ENST00000530996 SLC9A4Q6AI14 798 aa15.54■□□□□ 0.08
CHMP4A-204ENST00000530996 TMC3Q7Z5M5 1100 aa15.54■□□□□ 0.08
CHMP4A-204ENST00000530996 RBM12BQ8IXT5 1001 aaKnown RBP15.54■□□□□ 0.08
CHMP4A-204ENST00000530996 TTC30BQ8N4P2 665 aa15.54■□□□□ 0.08
CHMP4A-204ENST00000530996 SIDT2Q8NBJ9 832 aaKnown RBP15.54■□□□□ 0.08
CHMP4A-204ENST00000530996 SRPK1Q96SB4 655 aaKnown RBP15.54■□□□□ 0.08
CHMP4A-204ENST00000530996 PDE7BQ9NP56 450 aa15.54■□□□□ 0.08
CHMP4A-204ENST00000530996 ZNHIT6Q9NWK9 470 aaKnown RBP15.54■□□□□ 0.08
CHMP4A-204ENST00000530996 NENFQ9UMX5 172 aa15.54■□□□□ 0.08
CHMP4A-204ENST00000530996 PLAAQ9Y263 795 aa15.54■□□□□ 0.08
CHMP4A-204ENST00000530996 MAN2B2Q9Y2E5 1009 aa15.54■□□□□ 0.08
CHMP4A-204ENST00000530996 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.54■□□□□ 0.087e-7■■■□□ 19
CHMP4A-204ENST00000530996 KCNMB2Q9Y691 235 aa15.54■□□□□ 0.08
CHMP4A-204ENST00000530996 PTPN13Q12923 2485 aa15.54■□□□□ 0.08
CHMP4A-204ENST00000530996 PIPSLA2A3N6 862 aa15.53■□□□□ 0.08
CHMP4A-204ENST00000530996 ZNF487B1APH4 448 aa15.53■□□□□ 0.08
CHMP4A-204ENST00000530996 AKR1B10O60218 316 aa15.53■□□□□ 0.08
CHMP4A-204ENST00000530996 TMEM253P0C7T8 217 aa15.53■□□□□ 0.08
CHMP4A-204ENST00000530996 BRAFP15056 766 aa15.53■□□□□ 0.08
CHMP4A-204ENST00000530996 DNASE1L3Q13609 305 aa15.53■□□□□ 0.08
CHMP4A-204ENST00000530996 NOMO1Q15155 1222 aa15.53■□□□□ 0.08
CHMP4A-204ENST00000530996 PPP2R5EQ16537 467 aa15.53■□□□□ 0.08
CHMP4A-204ENST00000530996 CRTC2Q53ET0 693 aaPredicted RBP15.53■□□□□ 0.08
CHMP4A-204ENST00000530996 ZNF547Q8IVP9 402 aa15.53■□□□□ 0.08
CHMP4A-204ENST00000530996 TEX19Q8NA77 164 aa15.53■□□□□ 0.08
CHMP4A-204ENST00000530996 RNF25Q96BH1 459 aaPredicted RBP15.53■□□□□ 0.08
CHMP4A-204ENST00000530996 GLOD4Q9HC38 313 aa15.53■□□□□ 0.08
CHMP4A-204ENST00000530996 SLC40A1Q9NP59 571 aa15.53■□□□□ 0.08
CHMP4A-204ENST00000530996 RARRES3Q9UL19 164 aa15.53■□□□□ 0.08
CHMP4A-204ENST00000530996 SPO11Q9Y5K1 396 aa15.53■□□□□ 0.08
CHMP4A-204ENST00000530996 AURKAO14965 403 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 SPAG6O75602 509 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 MT-ND3P03897 115 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 PPP1CAP62136 330 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 SRSF1Q07955 248 aaKnown RBP eCLIP15.52■□□□□ 0.081e-6■□□□□ 9.8
CHMP4A-204ENST00000530996 SLC14A2Q15849 920 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 ATP13A5Q4VNC0 1218 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 AGAP9Q5VTM2 703 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 KLHL35Q6PF15 583 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 FAM151BQ6UXP7 276 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 ASB18Q6ZVZ8 466 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 TMEM135Q86UB9 458 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 ATCAYQ86WG3 371 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 SLC25A41Q8N5S1 370 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 GPR150Q8NGU9 434 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 SLC35G2Q8TBE7 412 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 CT55Q8WUE5 264 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 OLFM3Q96PB7 478 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 VPS35Q96QK1 796 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 IMP3Q9NV31 184 aaKnown RBP15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 PSMD13Q9UNM6 376 aa15.52■□□□□ 0.08
CHMP4A-204ENST00000530996 C3orf70A6NLC5 250 aaPredicted RBP15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 GPR39O43194 453 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 SPOPO43791 374 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 TPM1P09493 284 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 NELFEP18615 380 aaKnown RBP15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 PTPN3P26045 913 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 AKT1P31749 480 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 SPAM1P38567 509 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 PMS2P54278 862 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 TMEM115Q12893 351 aaPredicted RBP15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 TRIM14Q14142 442 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 KCNAB1Q14722 419 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 DNTTIP2Q5QJE6 756 aaKnown RBP15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 KAZNQ674X7 775 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 ABRAXAS1Q6UWZ7 409 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 GLT6D1Q7Z4J2 308 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 AMZ2Q86W34 360 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 VSIG1Q86XK7 387 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 BLOC1S5Q8TDH9 187 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 ACTL8Q9H568 366 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 SPTLC3Q9NUV7 552 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 KLHL8Q9P2G9 620 aaPredicted RBP15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 FAM8A1Q9UBU6 413 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 FAM153AQ9UHL3 310 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 PADI1Q9ULC6 663 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 WDR37Q9Y2I8 494 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 COL12A1Q99715 3063 aa15.51■□□□□ 0.07
CHMP4A-204ENST00000530996 NAV2Q8IVL1 2488 aa15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 UBA6A0AVT1 1052 aaPredicted RBP15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 OR2AG2A6NM03 316 aa15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 MTSS1O43312 755 aa15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 CREG1O75629 220 aa15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 TIAF1O95411 115 aa15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 FURINP09958 794 aa15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 EBLN1P0CF75 366 aa15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 FGF5P12034 268 aa15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 NFKB1P19838 968 aa15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 WNT3AP56704 352 aa15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 XRCC4Q13426 336 aa15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 TEX44Q53QW1 395 aa15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 LDLRAP1Q5SW96 308 aa15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 ZDHHC20Q5W0Z9 365 aa15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 TCTN3Q6NUS6 607 aa15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 WASH2PQ6VEQ5 465 aa15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 RHOT2Q8IXI1 618 aa15.5■□□□□ 0.07
CHMP4A-204ENST00000530996 RHOT1Q8IXI2 618 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms