RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 CSNK1DP48730 415 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 POLR2JP52435 117 aaKnown RBP17.01■□□□□ 0.31
BRCA2-204ENST00000530893 RAB33AQ14088 237 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 NRF1Q16656 503 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 AASDHQ4L235 1098 aaPredicted RBP17.01■□□□□ 0.31
BRCA2-204ENST00000530893 PITRM1Q5JRX3 1037 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 C6orf136Q5SQH8 315 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 NAIF1Q69YI7 327 aaPredicted RBP17.01■□□□□ 0.31
BRCA2-204ENST00000530893 HMBOX1Q6NT76 420 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 DNAJB7Q7Z6W7 309 aaPredicted RBP17.01■□□□□ 0.31
BRCA2-204ENST00000530893 METTL3Q86U44 580 aaKnown RBP17.01■□□□□ 0.31
BRCA2-204ENST00000530893 FAM217AQ8IXS0 508 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 NAT14Q8WUY8 206 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 PIH1D2Q8WWB5 315 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 ACDQ96AP0 544 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 TMEM125Q96AQ2 219 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 DGCR14Q96DF8 476 aaKnown RBP17.01■□□□□ 0.31
BRCA2-204ENST00000530893 CAPNS2Q96L46 248 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 CLPBQ9H078 707 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 GNPTGQ9UJJ9 305 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 APPL1Q9UKG1 709 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 MAFFQ9ULX9 164 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 ST14Q9Y5Y6 855 aa17.01■□□□□ 0.31
BRCA2-204ENST00000530893 IFRD1O00458 451 aaPredicted RBP17■□□□□ 0.31
BRCA2-204ENST00000530893 RAD51BO15315 384 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 AKAP10O43572 662 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 OR4F21O95013 312 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 OLFM2O95897 454 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 FCGR1AP12314 374 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 ZFP36L2P47974 494 aaKnown RBP17■□□□□ 0.31
BRCA2-204ENST00000530893 RGS4P49798 205 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 EPHB3P54753 998 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 EEFSECP57772 596 aaKnown RBP17■□□□□ 0.31
BRCA2-204ENST00000530893 APOFQ13790 326 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 FBXO48Q5FWF7 155 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 TBCELQ5QJ74 424 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 Q6ZNB5 142 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 ZBTB49Q6ZSB9 765 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 LYSMD3Q7Z3D4 306 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 SATL1Q86VE3 508 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 RBFAQ8N0V3 343 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 PDPRQ8NCN5 879 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 HIPK3Q9H422 1215 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 ALG2Q9H553 416 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 SARS2Q9NP81 518 aaKnown RBP17■□□□□ 0.31
BRCA2-204ENST00000530893 HEBP1Q9NRV9 189 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 SMPD4Q9NXE4 827 aa17■□□□□ 0.31
BRCA2-204ENST00000530893 FNDC3AQ9Y2H6 1198 aaKnown RBP17■□□□□ 0.31
BRCA2-204ENST00000530893 FCF1Q9Y324 198 aaKnown RBP17■□□□□ 0.31
BRCA2-204ENST00000530893 PRRG1O14668 218 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 GREM1O60565 184 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 SOCS5O75159 536 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 TIPRLO75663 272 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 PGM3O95394 542 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 UMPSP11172 480 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 CSKP41240 450 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 PRKG2Q13237 762 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 CAPRIN1Q14444 709 aaKnown RBP16.99■□□□□ 0.31
BRCA2-204ENST00000530893 PTRHD1Q6GMV3 140 aaKnown RBP16.99■□□□□ 0.31
BRCA2-204ENST00000530893 SBSNQ6UWP8 590 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 SNX20Q7Z614 316 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 TMEM150AQ86TG1 271 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 CARM1Q86X55 608 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 CAMK1DQ8IU85 385 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 TCEAL8Q8IYN2 117 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 FNDC5Q8NAU1 212 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 OR2T11Q8NH01 316 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 EID2BQ96D98 161 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 PLEKHG4BQ96PX9 1271 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 CIB1Q99828 191 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 HERC2P3Q9BVR0 1158 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 ZFYVE1Q9HBF4 777 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 AGPAT4Q9NRZ5 378 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 ARPC2O15144 300 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 HTRA2O43464 458 aaPredicted RBP16.99■□□□□ 0.31
BRCA2-204ENST00000530893 SYNCRIPO60506 623 aaKnown RBP16.99■□□□□ 0.31
BRCA2-204ENST00000530893 PQBP1O60828 265 aaKnown RBP16.99■□□□□ 0.31
BRCA2-204ENST00000530893 OTCP00480 354 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 C7P10643 843 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 MSH3P20585 1137 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 FASP25445 335 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 ERVPABLB-1P60509 514 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 EMX2Q04743 252 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 CRY1Q16526 586 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 METTL2BQ6P1Q9 378 aaKnown RBP16.99■□□□□ 0.31
BRCA2-204ENST00000530893 Q6ZSR9 355 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 AMIGO2Q86SJ2 522 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 ITIH5Q86UX2 942 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 SPPL2CQ8IUH8 684 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 DPP10Q8N608 796 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 CDYL2Q8N8U2 506 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 MFSD2AQ8NA29 543 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 METTL6Q8TCB7 284 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 TMEM169Q96HH4 297 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 ACOX2Q99424 681 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 PRPF18Q99633 342 aaKnown RBP16.99■□□□□ 0.31
BRCA2-204ENST00000530893 ANKRD60Q9BZ19 345 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 CIPCQ9C0C6 399 aa16.99■□□□□ 0.31
BRCA2-204ENST00000530893 ZNF106Q9H2Y7 1883 aaKnown RBP16.98■□□□□ 0.31
BRCA2-204ENST00000530893 TRBV5-4A0A0C4DH59 114 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms