RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 CHST9Q7L1S5 443 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 RNF148Q8N7C7 305 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 CCDC126Q96EE4 140 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 AARSD1Q9BTE6 412 aaKnown RBP11.45□□□□□ -0.58
USP35-207ENST00000530546 EML4Q9HC35 981 aaKnown RBP11.45□□□□□ -0.58
USP35-207ENST00000530546 SARS2Q9NP81 518 aaKnown RBP11.45□□□□□ -0.58
USP35-207ENST00000530546 SPG21Q9NZD8 308 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 PCDHB9Q9Y5E1 797 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 C7orf72A4D263 438 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 TRPC5OSA6NMA1 111 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 H3BMQ9 156 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 PPP6CO00743 305 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 UBFD1O14562 309 aaKnown RBP11.45□□□□□ -0.58
USP35-207ENST00000530546 PFDN6O15212 129 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 SLC22A2O15244 555 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 STX7O15400 261 aaKnown RBP11.45□□□□□ -0.58
USP35-207ENST00000530546 TEX28O15482 410 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 OR1I1O60431 355 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 ATE1O95260 518 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 GFAPP14136 432 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 CSF2RAP15509 400 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 XRCC1P18887 633 aaPredicted RBP11.45□□□□□ -0.58
USP35-207ENST00000530546 JAK1P23458 1154 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 MC4RP32245 332 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 TAF1AQ15573 450 aaPredicted RBP11.45□□□□□ -0.58
USP35-207ENST00000530546 PTPRNQ16849 979 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 PSAPL1Q6NUJ1 521 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 LYSMD3Q7Z3D4 306 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 PIANPQ8IYJ0 282 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 GPR150Q8NGU9 434 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 COG8Q96MW5 612 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 GSTO2Q9H4Y5 243 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 TMEM9Q9P0T7 183 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 GALPQ9UBC7 116 aa11.45□□□□□ -0.58
USP35-207ENST00000530546 NCF1BA6NI72 391 aaPredicted RBP11.44□□□□□ -0.58
USP35-207ENST00000530546 NCF1CA8MVU1 366 aaPredicted RBP11.44□□□□□ -0.58
USP35-207ENST00000530546 ANKRD66B4E2M5 251 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 F11P03951 625 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 CKMP06732 381 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 NCF1P14598 390 aaPredicted RBP11.44□□□□□ -0.58
USP35-207ENST00000530546 ZNF37AP17032 561 aaPredicted RBP11.44□□□□□ -0.58
USP35-207ENST00000530546 OGNP20774 298 aaKnown RBP11.44□□□□□ -0.58
USP35-207ENST00000530546 LPOP22079 712 aaPredicted RBP11.44□□□□□ -0.58
USP35-207ENST00000530546 ME2P23368 584 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 GABRR2P28476 465 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 MNX1P50219 401 aaPredicted RBP11.44□□□□□ -0.58
USP35-207ENST00000530546 HK2P52789 917 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 ATXN3P54252 364 aaPredicted RBP11.44□□□□□ -0.58
USP35-207ENST00000530546 CTBSQ01459 385 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 RAB33AQ14088 237 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 RFTN1Q14699 578 aaPredicted RBP11.44□□□□□ -0.58
USP35-207ENST00000530546 UNC50Q53HI1 259 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 AFTPHQ6ULP2 937 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 GK5Q6ZS86 529 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 TPGS1Q6ZTW0 290 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 TAS2R42Q7RTR8 314 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 GALNT7Q86SF2 657 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 SLC22A9Q8IVM8 553 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 HS6ST3Q8IZP7 471 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 DSELQ8IZU8 1212 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 USP13Q92995 863 aaPredicted RBP11.44□□□□□ -0.58
USP35-207ENST00000530546 CEP295NLQ96MC4 621 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 NPAS2Q99743 824 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 PSD2Q9BQI7 771 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 FEM1AQ9BSK4 669 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 TBX21Q9UL17 535 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 TRAF6Q9Y4K3 522 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 GOLGA8CPA6NN73 597 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 SUPT3HB4E1H0 165 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 WISP3O95389 354 aaPredicted RBP11.44□□□□□ -0.58
USP35-207ENST00000530546 PARNO95453 639 aaKnown RBP11.44□□□□□ -0.58
USP35-207ENST00000530546 PRAMEF12O95522 483 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 IMPDH1P20839 514 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 ITGB8P26012 769 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 GKP32189 559 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 GSSP48637 474 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 PCYT1AP49585 367 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 BMXP51813 675 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 PKNOX1P55347 436 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 CAMK2BQ13554 666 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 PHKG1Q16816 387 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 TRIM16LQ309B1 348 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 ZNF678Q5SXM1 525 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 APCDD1Q8J025 514 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 PGAM4Q8N0Y7 254 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 AFAP1L2Q8N4X5 818 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 MINDY2Q8NBR6 621 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 TRMT2BQ96GJ1 504 aaKnown RBP11.44□□□□□ -0.58
USP35-207ENST00000530546 NSUN5Q96P11 429 aaKnown RBP11.44□□□□□ -0.58
USP35-207ENST00000530546 CDRT15Q96T59 188 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 YME1L1Q96TA2 773 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 GPR21Q99679 349 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 HERC2P3Q9BVR0 1158 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 ADGRE3Q9BY15 652 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 CXorf21Q9HAI6 301 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 MRPL17Q9NRX2 175 aaKnown RBP11.44□□□□□ -0.58
USP35-207ENST00000530546 VPS51Q9UID3 782 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 CDC14AQ9UNH5 594 aa11.44□□□□□ -0.58
USP35-207ENST00000530546 TYW5A2RUC4 315 aaKnown RBP11.43□□□□□ -0.58
USP35-207ENST00000530546 TRIM64A6NGJ6 449 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms