RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 BCLAF3A2AJT9 711 aaKnown RBP5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 ASNA1O43681 348 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 EXOC3O60645 756 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 WDR47O94967 919 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 KCNK5O95279 499 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 TNNC2P02585 160 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 BMP5P22003 454 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 ANXA13P27216 316 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 MAGEA11P43364 429 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 NOVA1P51513 510 aaKnown RBP5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 SUMO2P61956 95 aaKnown RBP5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 GALNT1Q10472 559 aaPredicted RBP5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 FOXD4Q12950 439 aaPredicted RBP5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 RNASE12Q5GAN4 147 aaKnown RBP5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 DAB2IPQ5VWQ8 1189 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 VSTM1Q6UX27 236 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 STXBP4Q6ZWJ1 553 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 WDR53Q7Z5U6 358 aaPredicted RBP5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 P3H2Q8IVL5 708 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 ARL14EPQ8N8R7 260 aaPredicted RBP5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 NOC3LQ8WTT2 800 aaKnown RBP5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 EPSTI1Q96J88 318 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 CEP295NLQ96MC4 621 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 CYP2S1Q96SQ9 504 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 PKMYT1Q99640 499 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 SYT15Q9BQS2 421 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 STRA6Q9BX79 667 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 MTMR12Q9C0I1 747 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 NECTIN3Q9NQS3 549 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 OLFML3Q9NRN5 406 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 TM7SF3Q9NS93 570 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 EHD2Q9NZN4 543 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 TBC1D7Q9P0N9 293 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 SH3BP4Q9P0V3 963 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 SLC17A6Q9P2U8 582 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 MGAT4CQ9UBM8 478 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 CDH9Q9ULB4 789 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 ARHGAP26Q9UNA1 814 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 ZNF462Q96JM2 2506 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 ZZEF1O43149 2961 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 TCHHQ07283 1943 aa5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 DSPP15924 2871 aaKnown RBP5.29□□□□□ -1.56
AMBRA1-209ENST00000529963 VPS37CA5D8V6 355 aaPredicted RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 GOLGA8IPA6NC78 632 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 GOLGA6L3A6NEY3 463 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 MYMKA6NI61 221 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 GOLGA8JA6NMD2 632 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 J3KTA2 159 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 M0R3H8 397 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 TRIM38O00635 465 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 SLC9A3R1O14745 358 aaPredicted RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 NUDT3O95989 172 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 DLDP09622 509 aaKnown RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 TMEM225BP0DP42 221 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 STAT6P42226 847 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 CASP2P42575 452 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 PPP3CCP48454 512 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 DIO1P49895 249 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 NSUN2Q08J23 767 aaKnown RBP eCLIP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 SPARCL1Q14515 664 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 SOWAHAQ2M3V2 549 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 P3H1Q32P28 736 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 AARS2Q5JTZ9 985 aaKnown RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 PMS2CLQ68D20 193 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 TCEAL6Q6IPX3 200 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 ANO7Q6IWH7 933 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 FAM171BQ6P995 826 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 KIRREL2Q6UWL6 708 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 CCDC73Q6ZRK6 1079 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 DENND5BQ6ZUT9 1274 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 PTCHD4Q6ZW05 846 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 SLC29A4Q7RTT9 530 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 CCDC65Q8IXS2 484 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 GPD1LQ8N335 351 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 PPHLN1Q8NEY8 458 aaKnown RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 TCEAL3Q969E4 200 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 MYLPFQ96A32 169 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 TBC1D20Q96BZ9 403 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 DNAJC19Q96DA6 116 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 HPDLQ96IR7 371 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 SPATA17Q96L03 361 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 CNOT6LQ96LI5 555 aaKnown RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 SLC22A12Q96S37 553 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 PRPF18Q99633 342 aaKnown RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 CBWD1Q9BRT8 395 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 PDE11AQ9HCR9 933 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 TMEM9BQ9NQ34 198 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 FSCN3Q9NQT6 498 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 PANK4Q9NVE7 773 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 GCNT4Q9P109 453 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 LRFN1Q9P244 771 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 SIX4Q9UIU6 781 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 SRPRBQ9Y5M8 271 aaKnown RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 SCINQ9Y6U3 715 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 ANK1P16157 1881 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 ATG2BQ96BY7 2078 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 FRYQ5TBA9 3013 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 ZNF638Q14966 1978 aaKnown RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 ACACAQ13085 2346 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 LNP1A1A4G5 178 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms