RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 SLC24A2Q9UI40 661 aa12□□□□□ -0.49
TRAF3IP2-211ENST00000528599 ADAM21Q9UKJ8 722 aa12□□□□□ -0.49
TRAF3IP2-211ENST00000528599 VPS9D1Q9Y2B5 631 aa12□□□□□ -0.49
TRAF3IP2-211ENST00000528599 SLC17A4Q9Y2C5 497 aa12□□□□□ -0.49
TRAF3IP2-211ENST00000528599 SPTY2D1-AS1A0A0U1RR47 76 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 SMIM23A6NLE4 172 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 OR2AG2A6NM03 316 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 IQCF5A8MTL0 148 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 TLR4O00206 839 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 CHUKO15111 745 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 POLR3GO15318 223 aaPredicted RBP11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 NUAK1O60285 661 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 DNAJC6O75061 913 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 RALBP11234 206 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 PKMP14618 531 aaKnown RBP11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 AFF3P51826 1226 aaKnown RBP11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 ZNF844Q08AG5 666 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 IFFO1Q0D2I5 559 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 FZD2Q14332 565 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 PEAR1Q5VY43 1037 aaPredicted RBP11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 TMEM220Q6QAJ8 160 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 ADGRD1Q6QNK2 874 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 ENPP7Q6UWV6 458 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 MACC1Q6ZN28 852 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 SPATS2Q86XZ4 545 aaKnown RBP11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 SYT12Q8IV01 421 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 ZNF547Q8IVP9 402 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 SPNS2Q8IVW8 549 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 BEND7Q8N7W2 519 aaPredicted RBP11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 OR56A4Q8NGH8 313 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 OR1E3Q8WZA6 343 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 VPS39Q96JC1 886 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 TMEM109Q9BVC6 243 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 ZCCHC2Q9C0B9 1178 aaKnown RBP11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 EURLQ9NYK6 297 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 ZNF180Q9UJW8 692 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 MTO1Q9Y2Z2 717 aaKnown RBP11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 PRKAB1Q9Y478 270 aa11.99□□□□□ -0.49
TRAF3IP2-211ENST00000528599 A0A1B0GTW7 788 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 TLDC2A0PJX2 215 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 VILLO15195 856 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 NIPSNAP2O75323 286 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 ESR1P03372 595 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 KELP23276 732 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 HTR1BP28222 390 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 SPRP35270 261 aaPredicted RBP11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 LIMK2P53671 638 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 TIAL1Q01085 375 aaKnown RBP eCLIP11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 OVGP1Q12889 678 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 EIF2B5Q13144 721 aaKnown RBP11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 BMPR2Q13873 1038 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 GTF2H3Q13889 308 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 ALG11Q2TAA5 492 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 ALYREFQ86V81 257 aaKnown RBP11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 TDRPQ86YL5 185 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 GPATCH11Q8N954 259 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 LKAAEAR1Q8TD35 194 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 TSACCQ96A04 125 aaPredicted RBP11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 PDXPQ96GD0 296 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 SCARF2Q96GP6 870 aaPredicted RBP11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 AARSD1Q9BTE6 412 aaKnown RBP11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 MED16Q9Y2X0 877 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 PCDHB1Q9Y5F3 818 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 IKBKGQ9Y6K9 419 aa11.98□□□□□ -0.49
TRAF3IP2-211ENST00000528599 A0A1B0GVT2 93 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 FAM95CA0A1B0GW59 222 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 PRSS38A1L453 326 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 TNFRSF10CO14798 259 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 RASGRF2O14827 1237 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 SCAMP1O15126 338 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 GFRA3O60609 400 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 AP2A2O94973 939 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 IVLP07476 585 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 ITGA2BP08514 1039 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 GNSP15586 552 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 ITGB6P18564 788 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 TGM1P22735 817 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 PGGT1BP53609 377 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 CDKN2DP55273 166 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 NXPH1P58417 271 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 BNC1Q01954 994 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 PTK2BQ14289 1009 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 CCDC6Q16204 474 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 BCL7AQ4VC05 210 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 MROH9Q5TGP6 573 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 HECTD2Q5U5R9 776 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 PTRHD1Q6GMV3 140 aaKnown RBP11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 CRTC3Q6UUV7 619 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 DCP2Q8IU60 420 aaKnown RBP11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 TRAPPC5Q8IUR0 188 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 CYP4X1Q8N118 509 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 FAM136AQ96C01 138 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 GPR22Q99680 433 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 OLFM1Q99784 485 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 ROPN1BQ9BZX4 212 aaPredicted RBP11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 SMOC1Q9H4F8 434 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 PPCSQ9HAB8 311 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 ROPN1Q9HAT0 212 aaPredicted RBP11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 CYP4F12Q9HCS2 524 aa11.97□□□□□ -0.49
TRAF3IP2-211ENST00000528599 PARD6AQ9NPB6 346 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms