RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 SNRPB2P08579 225 aaKnown RBP14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 CISD3P0C7P0 127 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 CHRM1P11229 460 aaPredicted RBP14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 VIPR1P32241 457 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 VHLP40337 213 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 SPINT3P49223 89 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 DGKGP49619 791 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 NUDT2P50583 147 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 ST8SIA6P61647 398 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 FASTKQ14296 549 aaKnown RBP14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 RCN1Q15293 331 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 CMPK2Q5EBM0 449 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 SULT1C3Q6IMI6 304 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 OGFOD2Q6N063 350 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 BNC2Q6ZN30 1099 aaPredicted RBP14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 GPR26Q8NDV2 337 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 RIN3Q8TB24 985 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 FRS2Q8WU20 508 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 SMG7Q92540 1137 aaKnown RBP14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 KLHL32Q96NJ5 620 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 TNFRSF12AQ9NP84 129 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 RIC8BQ9NVN3 520 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 SMOXQ9NWM0 555 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 IKZF3Q9UKT9 509 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 G3BP2Q9UN86 482 aaKnown RBP14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 MTF2Q9Y483 593 aaPredicted RBP14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 HCFC2Q9Y5Z7 792 aa14.58□□□□□ -0.07
ECHDC1-220ENST00000528402 CFAP99D6REC4 459 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 FFAR2O15552 330 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 BNIP3LO60238 219 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 AP2A2O94973 939 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 TRIM16O95361 564 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 NFATC1O95644 943 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 ADH5P11766 374 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 PCSK2P16519 638 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 CEBPBP17676 345 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 UGT1A6P19224 532 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 UGT1A1P22309 533 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 UGT1A4P22310 534 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 UGT1A3P35503 534 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 UGT1A5P35504 534 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 NTHL1P78549 312 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 CLEC6AQ6EIG7 209 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 GPRIN3Q6ZVF9 776 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 Q6ZVU0 165 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 RCN3Q96D15 328 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 RSRC1Q96IZ7 334 aaKnown RBP14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 MRGPRX3Q96LB0 322 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 ZSWIM3Q96MP5 696 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 CDCA3Q99618 268 aaPredicted RBP14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 AKTIPQ9H8T0 292 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 SEMA4BQ9NPR2 832 aaPredicted RBP14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 B4GALT6Q9UBX8 382 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 IL36AQ9UHA7 158 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 SARDHQ9UL12 918 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 WNT6Q9Y6F9 365 aa14.58□□□□□ -0.08
ECHDC1-220ENST00000528402 IQCF5A8MTL0 148 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 H0Y3Z8 333 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 E2F3O00716 465 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 KRT36O76013 467 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 MATN4O95460 622 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 ENO2P09104 434 aaPredicted RBP14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 IDO1P14902 403 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 VCLP18206 1134 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 XPAP23025 273 aaPredicted RBP14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 PSMD8P48556 350 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 PTDSS1P48651 473 aaKnown RBP14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 PIK3CGP48736 1102 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 HK3P52790 923 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 CDKL1Q00532 357 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 RBBP7Q16576 425 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 MMEL1Q495T6 779 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 AGKQ53H12 422 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 ZNF805Q5CZA5 627 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 SBSNQ6UWP8 590 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 RNF165Q6ZSG1 346 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 RPS27LQ71UM5 84 aaKnown RBP14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 TSPAN33Q86UF1 283 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 DDIASQ8IXT1 998 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 TCAIMQ8N3R3 496 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 PCYOX1LQ8NBM8 494 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 UBTD2Q8WUN7 234 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 ROPN1LQ96C74 230 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 DCUN1D1Q96GG9 259 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 CLPTM1LQ96KA5 538 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 BOCQ9BWV1 1114 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 TRIM54Q9BYV2 358 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 FAM83DQ9H4H8 585 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 SFXN1Q9H9B4 322 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 WDR41Q9HAD4 459 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 PTBP2Q9UKA9 531 aaKnown RBP14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 POMPQ9Y244 141 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 NDUFAF1Q9Y375 327 aa14.57□□□□□ -0.08
ECHDC1-220ENST00000528402 A0A0U1RQS6 177 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 UPK3BL1B0FP48 263 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 UPK3BL2E5RIL1 263 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 PSMD11O00231 422 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 PIP5K1BO14986 540 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 SLC16A5O15375 505 aa14.56□□□□□ -0.08
ECHDC1-220ENST00000528402 OTCP00480 354 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms