RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 DMPKQ09013 629 aa32.52■■■□□ 2.8
SSSCA1-205ENST00000527920 NFATC2Q13469 925 aa32.52■■■□□ 2.8
SSSCA1-205ENST00000527920 PTPRCAPQ14761 206 aa32.52■■■□□ 2.8
SSSCA1-205ENST00000527920 PLA2G4EQ3MJ16 856 aa32.52■■■□□ 2.8
SSSCA1-205ENST00000527920 MEI1Q5TIA1 1274 aa32.52■■■□□ 2.8
SSSCA1-205ENST00000527920 RASGEF1AQ8N9B8 481 aa32.52■■■□□ 2.8
SSSCA1-205ENST00000527920 ALS2CR12Q96Q35 445 aa32.52■■■□□ 2.8
SSSCA1-205ENST00000527920 PSMD3O43242 534 aa32.51■■■□□ 2.79
SSSCA1-205ENST00000527920 METTL18O95568 372 aa32.51■■■□□ 2.79
SSSCA1-205ENST00000527920 IDSP22304 550 aa32.51■■■□□ 2.79
SSSCA1-205ENST00000527920 OASLQ15646 514 aaKnown RBP32.51■■■□□ 2.79
SSSCA1-205ENST00000527920 ZNF761Q86XN6 746 aaPredicted RBP32.51■■■□□ 2.79
SSSCA1-205ENST00000527920 SLC13A5Q86YT5 568 aaPredicted RBP32.51■■■□□ 2.79
SSSCA1-205ENST00000527920 DNAJC16Q9Y2G8 782 aa32.51■■■□□ 2.79
SSSCA1-205ENST00000527920 AGAP14A8MT82 685 aa32.5■■■□□ 2.79
SSSCA1-205ENST00000527920 PDZK1P1A8MUH7 402 aa32.5■■■□□ 2.79
SSSCA1-205ENST00000527920 KLK10O43240 276 aa32.5■■■□□ 2.79
SSSCA1-205ENST00000527920 LIASO43766 372 aa32.5■■■□□ 2.79
SSSCA1-205ENST00000527920 SRP72O76094 671 aaKnown RBP32.5■■■□□ 2.79
SSSCA1-205ENST00000527920 HADHAP40939 763 aa32.5■■■□□ 2.79
SSSCA1-205ENST00000527920 XIAPP98170 497 aa32.5■■■□□ 2.79
SSSCA1-205ENST00000527920 SPARCL1Q14515 664 aa32.5■■■□□ 2.79
SSSCA1-205ENST00000527920 RPS6KA1Q15418 735 aa32.5■■■□□ 2.79
SSSCA1-205ENST00000527920 AGBL5Q8NDL9 886 aa32.5■■■□□ 2.79
SSSCA1-205ENST00000527920 POT1Q9NUX5 634 aa32.5■■■□□ 2.79
SSSCA1-205ENST00000527920 SCHIP1Q9P0W5 487 aaPredicted RBP32.5■■■□□ 2.79
SSSCA1-205ENST00000527920 FKBPLQ9UIM3 349 aa32.5■■■□□ 2.79
SSSCA1-205ENST00000527920 KCTD3Q9Y597 815 aa32.5■■■□□ 2.79
SSSCA1-205ENST00000527920 ZNF106Q9H2Y7 1883 aaKnown RBP32.49■■■□□ 2.79
SSSCA1-205ENST00000527920 KLHL33A6NCF5 533 aa32.49■■■□□ 2.79
SSSCA1-205ENST00000527920 AP2A1O95782 977 aa32.49■■■□□ 2.79
SSSCA1-205ENST00000527920 ITIH1P19827 911 aa32.49■■■□□ 2.79
SSSCA1-205ENST00000527920 CA5AP35218 305 aa32.49■■■□□ 2.79
SSSCA1-205ENST00000527920 TMPRSS3P57727 454 aa32.49■■■□□ 2.79
SSSCA1-205ENST00000527920 LONRF2Q1L5Z9 754 aa32.49■■■□□ 2.79
SSSCA1-205ENST00000527920 AMZ2Q86W34 360 aa32.49■■■□□ 2.79
SSSCA1-205ENST00000527920 JAMLQ86YT9 394 aa32.49■■■□□ 2.79
SSSCA1-205ENST00000527920 RBM12BQ8IXT5 1001 aaKnown RBP32.49■■■□□ 2.79
SSSCA1-205ENST00000527920 ATG4AQ8WYN0 398 aa32.49■■■□□ 2.79
SSSCA1-205ENST00000527920 ERI2A8K979 691 aaKnown RBP32.48■■■□□ 2.79
SSSCA1-205ENST00000527920 LDB2O43679 373 aa32.48■■■□□ 2.79
SSSCA1-205ENST00000527920 BRAFP15056 766 aa32.48■■■□□ 2.79
SSSCA1-205ENST00000527920 ETV5P41161 510 aa32.48■■■□□ 2.79
SSSCA1-205ENST00000527920 CTSCP53634 463 aa32.48■■■□□ 2.79
SSSCA1-205ENST00000527920 FCRL3Q96P31 734 aaPredicted RBP32.48■■■□□ 2.79
SSSCA1-205ENST00000527920 ASB8Q9H765 288 aa32.48■■■□□ 2.79
SSSCA1-205ENST00000527920 ZNF624Q9P2J8 865 aaPredicted RBP32.48■■■□□ 2.79
SSSCA1-205ENST00000527920 IGSF10Q6WRI0 2623 aa32.48■■■□□ 2.79
SSSCA1-205ENST00000527920 NRDCO43847 1150 aa32.47■■■□□ 2.79
SSSCA1-205ENST00000527920 VIPP01282 170 aa32.47■■■□□ 2.79
SSSCA1-205ENST00000527920 MSH3P20585 1137 aa32.47■■■□□ 2.79
SSSCA1-205ENST00000527920 CD82P27701 267 aa32.47■■■□□ 2.79
SSSCA1-205ENST00000527920 SLC19A1P41440 591 aa32.47■■■□□ 2.79
SSSCA1-205ENST00000527920 CCZ1BP86790 482 aa32.47■■■□□ 2.79
SSSCA1-205ENST00000527920 CCZ1P86791 482 aaPredicted RBP32.47■■■□□ 2.79
SSSCA1-205ENST00000527920 CLN3Q13286 438 aa32.47■■■□□ 2.79
SSSCA1-205ENST00000527920 TMEM26Q6ZUK4 368 aa32.47■■■□□ 2.79
SSSCA1-205ENST00000527920 TRIM48Q8IWZ4 208 aa32.47■■■□□ 2.79
SSSCA1-205ENST00000527920 RCBTB1Q8NDN9 531 aa32.47■■■□□ 2.79
SSSCA1-205ENST00000527920 OR13C4Q8NGS5 318 aa32.47■■■□□ 2.79
SSSCA1-205ENST00000527920 ULK4Q96C45 1275 aa32.47■■■□□ 2.79
SSSCA1-205ENST00000527920 ZMYND15Q9H091 742 aa32.47■■■□□ 2.79
SSSCA1-205ENST00000527920 LZTFL1Q9NQ48 299 aa32.47■■■□□ 2.79
SSSCA1-205ENST00000527920 TMEM9Q9P0T7 183 aa32.47■■■□□ 2.79
SSSCA1-205ENST00000527920 POP7O75817 140 aaKnown RBP32.46■■■□□ 2.79
SSSCA1-205ENST00000527920 AKT1P31749 480 aa32.46■■■□□ 2.79
SSSCA1-205ENST00000527920 TMEM164Q5U3C3 297 aa32.46■■■□□ 2.79
SSSCA1-205ENST00000527920 TMEM220Q6QAJ8 160 aa32.46■■■□□ 2.79
SSSCA1-205ENST00000527920 LINC00523Q86TU6 105 aa32.46■■■□□ 2.79
SSSCA1-205ENST00000527920 TRIM58Q8NG06 486 aa32.46■■■□□ 2.79
SSSCA1-205ENST00000527920 SNRNP27Q8WVK2 155 aaKnown RBP32.46■■■□□ 2.79
SSSCA1-205ENST00000527920 PCDHGA3Q9Y5H0 932 aa32.46■■■□□ 2.79
SSSCA1-205ENST00000527920 H7C0S8 307 aa32.45■■■□□ 2.79
SSSCA1-205ENST00000527920 ITGALP20701 1170 aa32.45■■■□□ 2.79
SSSCA1-205ENST00000527920 RPL10P27635 214 aaKnown RBP32.45■■■□□ 2.79
SSSCA1-205ENST00000527920 CSTF2P33240 577 aaKnown RBP eCLIP32.45■■■□□ 2.79
SSSCA1-205ENST00000527920 SEPT7Q16181 437 aaKnown RBP32.45■■■□□ 2.79
SSSCA1-205ENST00000527920 BCL7AQ4VC05 210 aa32.45■■■□□ 2.79
SSSCA1-205ENST00000527920 GPR155Q7Z3F1 870 aa32.45■■■□□ 2.79
SSSCA1-205ENST00000527920 USP7Q93009 1102 aa32.45■■■□□ 2.79
SSSCA1-205ENST00000527920 BPTFQ12830 3046 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 PRAMEF33A0A0G2JMD5 474 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 OR2AG2A6NM03 316 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 C9orf172C9J069 976 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 PRAMEF10O60809 474 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 CCL4P13236 92 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 HALP42357 657 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 MAPK10P53779 464 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 GPR33Q49SQ1 333 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 ARHGAP22Q7Z5H3 698 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 SNX20Q7Z614 316 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 HEXDCQ8WVB3 486 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 NCSTNQ92542 709 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 TAAR9Q96RI9 348 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 TBC1D10AQ9BXI6 508 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 SLC40A1Q9NP59 571 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 EIF2AK3Q9NZJ5 1116 aaKnown RBP32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 CRLS1Q9UJA2 301 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 ZNF148Q9UQR1 794 aa32.44■■■□□ 2.78
SSSCA1-205ENST00000527920 MN1Q10571 1320 aaPredicted RBP32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms