RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 CILP2Q8IUL8 1156 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 TRAPPC5Q8IUR0 188 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 ZBED8Q8IZ13 594 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 SDR16C5Q8N3Y7 309 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 HEXDCQ8WVB3 486 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.4■□□□□ 0.228e-8■■■■■ 61.9
SMCO4-204ENST00000527149 SGF29Q96ES7 293 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 CFAP36Q96G28 342 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 CAMK1GQ96NX5 476 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 RHOXF2Q9BQY4 288 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 TIMM29Q9BSF4 260 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 FOXP3Q9BZS1 431 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 SAYSD1Q9NPB0 183 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 NLGN3Q9NZ94 848 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 ZNHIT2Q9UHR6 403 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 PCOLCE2Q9UKZ9 415 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 GPSM3Q9Y4H4 160 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 U3KQA8 63 aa16.4■□□□□ 0.22
SMCO4-204ENST00000527149 RP1P56715 2156 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 A6NCN8 305 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 OR2AG2A6NM03 316 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 TPP1O14773 563 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 KMOO15229 486 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 C1QAP02745 245 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 CTSEP14091 401 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 ATP1B2P14415 290 aaPredicted RBP16.39■□□□□ 0.21
SMCO4-204ENST00000527149 TTPAP49638 278 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 CLCNKAP51800 687 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 DMPKQ09013 629 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 ILF3Q12906 894 aaKnown RBP eCLIP16.39■□□□□ 0.21
SMCO4-204ENST00000527149 GTF2H3Q13889 308 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 SUZ12Q15022 739 aaKnown RBP16.39■□□□□ 0.21
SMCO4-204ENST00000527149 RSPO4Q2I0M5 234 aaPredicted RBP16.39■□□□□ 0.21
SMCO4-204ENST00000527149 PROX2Q3B8N5 592 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 C6orf132Q5T0Z8 1188 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 LYPLAL1Q5VWZ2 237 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 ZNF470Q6ECI4 717 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 TMEM220Q6QAJ8 160 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 SFTPA2Q8IWL1 248 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 CNTN4Q8IWV2 1026 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 CLDN19Q8N6F1 224 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 BEND7Q8N7W2 519 aaPredicted RBP16.39■□□□□ 0.21
SMCO4-204ENST00000527149 LPGAT1Q92604 370 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 DCUN1D1Q96GG9 259 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 ZNF514Q96K75 400 aaPredicted RBP16.39■□□□□ 0.21
SMCO4-204ENST00000527149 LINC00615Q96LM1 132 aaPredicted RBP16.39■□□□□ 0.21
SMCO4-204ENST00000527149 GSDMCQ9BYG8 508 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 DLL3Q9NYJ7 618 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 CDV3Q9UKY7 258 aaKnown RBP16.39■□□□□ 0.21
SMCO4-204ENST00000527149 GPR34Q9UPC5 381 aa16.39■□□□□ 0.21
SMCO4-204ENST00000527149 NEMP2A6NFY4 417 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 CFAP99D6REC4 459 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 SIGLEC6O43699 453 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 EML2O95834 649 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 F7P08709 466 aaPredicted RBP16.38■□□□□ 0.21
SMCO4-204ENST00000527149 ZNF7P17097 686 aaPredicted RBP16.38■□□□□ 0.21
SMCO4-204ENST00000527149 NSG1P42857 185 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 CUL1Q13616 776 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 INAVAQ3KP66 663 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 PLA2G4EQ3MJ16 856 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 HSP90AA5PQ58FG0 334 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 ZNF789Q5FWF6 425 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 TEX35Q5T0J7 233 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 MRNIPQ6NTE8 343 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 SLC30A9Q6PML9 568 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 LVRNQ6Q4G3 990 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 CHST15Q7LFX5 561 aaPredicted RBP16.38■□□□□ 0.21
SMCO4-204ENST00000527149 KCNMB4Q86W47 210 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 GKN2Q86XP6 184 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 DENND6AQ8IWF6 608 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 EID2Q8N6I1 236 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 FAM181AQ8N9Y4 354 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 SCG3Q8WXD2 468 aaKnown RBP16.38■□□□□ 0.21
SMCO4-204ENST00000527149 CERS2Q96G23 380 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 TTC25Q96NG3 672 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 P2RY12Q9H244 342 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 C20orf96Q9NUD7 363 aaPredicted RBP16.38■□□□□ 0.21
SMCO4-204ENST00000527149 SPATS2LQ9NUQ6 558 aaKnown RBP16.38■□□□□ 0.21
SMCO4-204ENST00000527149 MOCS1Q9NZB8 636 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 TAAR2Q9P1P5 351 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 SLC17A6Q9P2U8 582 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 KCNK6Q9Y257 313 aa16.38■□□□□ 0.21
SMCO4-204ENST00000527149 NOBOXO60393 691 aa16.37■□□□□ 0.21
SMCO4-204ENST00000527149 AP2A2O94973 939 aa16.37■□□□□ 0.21
SMCO4-204ENST00000527149 SLU7O95391 586 aaKnown RBP16.37■□□□□ 0.21
SMCO4-204ENST00000527149 ANXA6P08133 673 aa16.37■□□□□ 0.21
SMCO4-204ENST00000527149 ERVK-10P10266 1014 aa16.37■□□□□ 0.21
SMCO4-204ENST00000527149 RALBP11234 206 aa16.37■□□□□ 0.21
SMCO4-204ENST00000527149 CSRP1P21291 193 aaKnown RBP16.37■□□□□ 0.21
SMCO4-204ENST00000527149 ACTR1BP42025 376 aa16.37■□□□□ 0.21
SMCO4-204ENST00000527149 SLC1A2P43004 574 aa16.37■□□□□ 0.21
SMCO4-204ENST00000527149 MAGEA4P43358 317 aa16.37■□□□□ 0.21
SMCO4-204ENST00000527149 GPX6P59796 221 aa16.37■□□□□ 0.21
SMCO4-204ENST00000527149 ACTR1AP61163 376 aa16.37■□□□□ 0.21
SMCO4-204ENST00000527149 UBAP2Q5T6F2 1119 aaKnown RBP16.37■□□□□ 0.21
SMCO4-204ENST00000527149 OGFOD3Q6PK18 319 aa16.37■□□□□ 0.21
SMCO4-204ENST00000527149 FAM83HQ6ZRV2 1179 aaPredicted RBP16.37■□□□□ 0.21
SMCO4-204ENST00000527149 TAF8Q7Z7C8 310 aa16.37■□□□□ 0.21
SMCO4-204ENST00000527149 CCDC25Q86WR0 208 aa16.37■□□□□ 0.21
SMCO4-204ENST00000527149 C17orf82Q86X59 251 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms