RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 PLCL1Q15111 1095 aa11.85□□□□□ -0.51
CHMP1B-201ENST00000526991 ZIK1Q3SY52 487 aaPredicted RBP11.85□□□□□ -0.51
CHMP1B-201ENST00000526991 OTUD3Q5T2D3 398 aaPredicted RBP11.85□□□□□ -0.51
CHMP1B-201ENST00000526991 ATXN7L2Q5T6C5 722 aaPredicted RBP11.85□□□□□ -0.51
CHMP1B-201ENST00000526991 ANKS6Q68DC2 871 aa11.85□□□□□ -0.51
CHMP1B-201ENST00000526991 CMTR2Q8IYT2 770 aaKnown RBP11.85□□□□□ -0.51
CHMP1B-201ENST00000526991 LRRC43Q8N309 656 aa11.85□□□□□ -0.51
CHMP1B-201ENST00000526991 FNDC5Q8NAU1 212 aa11.85□□□□□ -0.51
CHMP1B-201ENST00000526991 OR2T11Q8NH01 316 aa11.85□□□□□ -0.51
CHMP1B-201ENST00000526991 STAG3L4Q8TBR4 150 aa11.85□□□□□ -0.51
CHMP1B-201ENST00000526991 IGSF21Q96ID5 467 aa11.85□□□□□ -0.51
CHMP1B-201ENST00000526991 PAWRQ96IZ0 340 aaKnown RBP11.85□□□□□ -0.51
CHMP1B-201ENST00000526991 PPM1MQ96MI6 270 aa11.85□□□□□ -0.51
CHMP1B-201ENST00000526991 TMX2-CTNND1H3BSU7 103 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 ARPC2O15144 300 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 SNX2O60749 519 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 WISP3O95389 354 aaPredicted RBP11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 CNPP09543 421 aaKnown RBP11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 HLA-DPA1P20036 260 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 MZF1P28698 734 aaPredicted RBP11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 SLC5A2P31639 672 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 DGKQP52824 942 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 OXCT1P55809 520 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 PPP1R8Q12972 351 aaKnown RBP11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 PARP15Q460N3 678 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 LRRC73Q5JTD7 316 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 C6orf183Q5T699 404 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 SLC2A7Q6PXP3 512 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 B3GNT6Q6ZMB0 384 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 WFDC5Q8TCV5 224 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 FUBP1Q96AE4 644 aaKnown RBP11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 DCUN1D5Q9BTE7 237 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 TRMOQ9BU70 441 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 SCUBE2Q9NQ36 999 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 SMOXQ9NWM0 555 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 UBA2Q9UBT2 640 aaPredicted RBP11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 FCF1Q9Y324 198 aaKnown RBP11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 SQORQ9Y6N5 450 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 IGLV3-10A0A075B6K4 115 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 A0A1W2PQ67 120 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 ZNF840PA6NDX5 716 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 E5RI56 91 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 TMEM189-UBE2V1I3L0A0 370 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 TRPC1P48995 793 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 HTR6P50406 440 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 HK3P52790 923 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 SMAD3P84022 425 aaKnown RBP11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 LCP2Q13094 533 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 SLC39A5Q6ZMH5 540 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 EPHX4Q8IUS5 362 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 PHYKPLQ8IUZ5 450 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 NCSTNQ92542 709 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 VPS50Q96JG6 964 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 FEM1CQ96JP0 617 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 ZNF597Q96LX8 424 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 OLAHQ9NV23 265 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 DUS2Q9NX74 493 aaKnown RBP11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 DNMT3LQ9UJW3 386 aa11.84□□□□□ -0.51
CHMP1B-201ENST00000526991 FFAR3O14843 346 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 GIPC1O14908 333 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 GPR42O15529 346 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 AP1G1O43747 822 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 ALPIP09923 528 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 PIM1P11309 404 aaPredicted RBP11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 GSK3BP49841 420 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 PSMD7P51665 324 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 KCNK10P57789 538 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 LIPEQ05469 1076 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 DYNC1I2Q13409 638 aaKnown RBP11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 HECTD3Q5T447 861 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 RNF219Q5W0B1 726 aaPredicted RBP11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 MAGEE2Q8TD90 523 aaPredicted RBP11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 RMND5BQ96G75 393 aaPredicted RBP11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 BEGAINQ9BUH8 593 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 SLC2A11Q9BYW1 496 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 RETREG1Q9H6L5 497 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 ZNF696Q9H7X3 374 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 RAI2Q9Y5P3 530 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 MAGED1Q9Y5V3 778 aaPredicted RBP11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 FRMPD3Q5JV73 1810 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 EI24O14681 340 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 ACSL4O60488 711 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 SYNCRIPO60506 623 aaKnown RBP11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 CYBBP04839 570 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 HALP42357 657 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 GDF5P43026 501 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 MTPNP58546 118 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 KANK2Q63ZY3 851 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 HS6ST3Q8IZP7 471 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 CLDN19Q8N6F1 224 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 NAT16Q8N8M0 369 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 APOL5Q9BWW9 433 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 CWH43Q9H720 699 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 TRMT6Q9UJA5 497 aaKnown RBP11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 AGO1Q9UL18 857 aaKnown RBP11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 CLEC4EQ9ULY5 219 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 MYRFQ9Y2G1 1151 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 YIPF1Q9Y548 306 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 PCDHB9Q9Y5E1 797 aa11.83□□□□□ -0.52
CHMP1B-201ENST00000526991 ASPDHA6ND91 283 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms