RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 KLHL38Q2WGJ6 581 aa16.29■□□□□ 0.2
CAPN1-205ENST00000526954 ZNF789Q5FWF6 425 aa16.29■□□□□ 0.2
CAPN1-205ENST00000526954 TMEM220Q6QAJ8 160 aa16.29■□□□□ 0.2
CAPN1-205ENST00000526954 LRRTM4Q86VH4 590 aa16.29■□□□□ 0.2
CAPN1-205ENST00000526954 GALNT13Q8IUC8 556 aa16.29■□□□□ 0.2
CAPN1-205ENST00000526954 HID1Q8IV36 788 aa16.29■□□□□ 0.2
CAPN1-205ENST00000526954 PHACTR4Q8IZ21 702 aa16.29■□□□□ 0.2
CAPN1-205ENST00000526954 HNRNPLLQ8WVV9 542 aaKnown RBP16.29■□□□□ 0.2
CAPN1-205ENST00000526954 UBLCP1Q8WVY7 318 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-205ENST00000526954 LINC00615Q96LM1 132 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-205ENST00000526954 BIRC8Q96P09 236 aa16.29■□□□□ 0.2
CAPN1-205ENST00000526954 ELF4Q99607 663 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-205ENST00000526954 CPNE1Q99829 537 aa16.29■□□□□ 0.2
CAPN1-205ENST00000526954 CARS2Q9HA77 564 aaKnown RBP16.29■□□□□ 0.2
CAPN1-205ENST00000526954 TRNAU1APQ9NX07 287 aaKnown RBP16.29■□□□□ 0.2
CAPN1-205ENST00000526954 DNAJC28Q9NX36 388 aa16.29■□□□□ 0.2
CAPN1-205ENST00000526954 NCDNQ9UBB6 729 aa16.29■□□□□ 0.2
CAPN1-205ENST00000526954 ZNHIT2Q9UHR6 403 aa16.29■□□□□ 0.2
CAPN1-205ENST00000526954 MOSPD1Q9UJG1 213 aa16.29■□□□□ 0.2
CAPN1-205ENST00000526954 CORO1CQ9ULV4 474 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-205ENST00000526954 CRYL1Q9Y2S2 319 aa16.29■□□□□ 0.2
CAPN1-205ENST00000526954 PCYT1BQ9Y5K3 369 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-205ENST00000526954 PSAT1Q9Y617 370 aa16.29■□□□□ 0.2
CAPN1-205ENST00000526954 COMMD10Q9Y6G5 202 aa16.29■□□□□ 0.2
CAPN1-205ENST00000526954 OTOGLQ3ZCN5 2332 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 UBA6A0AVT1 1052 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-205ENST00000526954 KLHL33A6NCF5 533 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 OR2AG2A6NM03 316 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 H3BMM5 538 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 KMOO15229 486 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 KCNJ13O60928 360 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 PIAS1O75925 651 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 GSTM1P09488 218 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 OR56A5P0C7T3 313 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 JUNDP17535 347 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 HSD17B3P37058 310 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 GNPDA1P46926 289 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 CD151P48509 253 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 CSE1LP55060 971 aaKnown RBP16.28■□□□□ 0.2
CAPN1-205ENST00000526954 HNRNPKP61978 463 aaKnown RBP eCLIP16.28■□□□□ 0.2
CAPN1-205ENST00000526954 GSTM4Q03013 218 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 CSRP2Q16527 193 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 HLA-BQ31612 363 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 CNSTQ6PJW8 725 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 DET1Q7L5Y6 550 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 RD3Q7Z3Z2 195 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 STRA8Q7Z7C7 330 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 C11orf96Q7Z7L8 435 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 TRAPPC5Q8IUR0 188 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 CTAGE3PQ8IX95 158 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 PPM1NQ8N819 430 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 OR2M4Q96R27 311 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 SLC13A1Q9BZW2 595 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 SMOC1Q9H4F8 434 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 FSCN3Q9NQT6 498 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 FETUBQ9UGM5 382 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 GNPTGQ9UJJ9 305 aa16.28■□□□□ 0.2
CAPN1-205ENST00000526954 MYO15AQ9UKN7 3530 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 A0A1B0GTQ1 180 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 C17orf113A0A1B0GUU1 675 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 H3BM21 787 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 YKT6O15498 198 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 CER1O95813 267 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 F7P08709 466 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-205ENST00000526954 PKMP14618 531 aaKnown RBP16.27■□□□□ 0.2
CAPN1-205ENST00000526954 ENGP17813 658 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 FMO4P31512 558 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 GP5P40197 560 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 ARRB1P49407 418 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-205ENST00000526954 EIF3BP55884 814 aaKnown RBP16.27■□□□□ 0.2
CAPN1-205ENST00000526954 SPEM2Q0P670 501 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 LRP8Q14114 963 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 EFTUD2Q15029 972 aaKnown RBP eCLIP16.27■□□□□ 0.24e-7■■■■□ 23.9
CAPN1-205ENST00000526954 SHBQ15464 509 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 ZNF542PQ5EBM4 170 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 CTSL3PQ5NE16 218 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 TCEAL6Q6IPX3 200 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 ZNF549Q6P9A3 640 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 CRTC3Q6UUV7 619 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 ZC3HC1Q86WB0 502 aaKnown RBP16.27■□□□□ 0.2
CAPN1-205ENST00000526954 TCEAL3Q969E4 200 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 TIMM29Q9BSF4 260 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 TMEM168Q9H0V1 697 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 TCEAL2Q9H3H9 227 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-205ENST00000526954 RHOJQ9H4E5 214 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 GAREM1Q9H706 876 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 SEMA4GQ9NTN9 838 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 TXNDC16Q9P2K2 825 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 APOBEC3BQ9UH17 382 aaKnown RBP16.27■□□□□ 0.2
CAPN1-205ENST00000526954 PRKAB1Q9Y478 270 aa16.27■□□□□ 0.2
CAPN1-205ENST00000526954 DMDP11532 3685 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 PRR19A6NJB7 356 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 POP7O75817 140 aaKnown RBP16.26■□□□□ 0.19
CAPN1-205ENST00000526954 FTH1P02794 183 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 TGM1P22735 817 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 CLCNKAP51800 687 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 DMPKQ09013 629 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 ZNF658BQ4V348 819 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-205ENST00000526954 PRAMEF14Q5SWL7 426 aa16.26■□□□□ 0.19
CAPN1-205ENST00000526954 BEND6Q5SZJ8 279 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms