RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 LIPCP11150 499 aa18.26■□□□□ 0.51
CAPN1-203ENST00000525013 XRCC1P18887 633 aaPredicted RBP18.26■□□□□ 0.51
CAPN1-203ENST00000525013 ADRA1AP35348 466 aa18.26■□□□□ 0.51
CAPN1-203ENST00000525013 EPHA4P54764 986 aa18.26■□□□□ 0.51
CAPN1-203ENST00000525013 DRG2P55039 364 aaKnown RBP18.26■□□□□ 0.51
CAPN1-203ENST00000525013 UBE2IP63279 158 aaKnown RBP18.26■□□□□ 0.51
CAPN1-203ENST00000525013 COL9A2Q14055 689 aaPredicted RBP18.26■□□□□ 0.51
CAPN1-203ENST00000525013 TAF1AQ15573 450 aaPredicted RBP18.26■□□□□ 0.51
CAPN1-203ENST00000525013 GPRC6AQ5T6X5 926 aa18.26■□□□□ 0.51
CAPN1-203ENST00000525013 WDR74Q6RFH5 385 aaPredicted RBP18.26■□□□□ 0.51
CAPN1-203ENST00000525013 ARHGEF18Q6ZSZ5 1173 aa18.26■□□□□ 0.51
CAPN1-203ENST00000525013 FAM71DQ8N9W8 422 aa18.26■□□□□ 0.51
CAPN1-203ENST00000525013 TTC13Q8NBP0 860 aa18.26■□□□□ 0.51
CAPN1-203ENST00000525013 OR4K2Q8NGD2 314 aa18.26■□□□□ 0.51
CAPN1-203ENST00000525013 ZNF398Q8TD17 642 aa18.26■□□□□ 0.51
CAPN1-203ENST00000525013 DTX3LQ8TDB6 740 aa18.26■□□□□ 0.51
CAPN1-203ENST00000525013 SLC39A7Q92504 469 aa18.26■□□□□ 0.51
CAPN1-203ENST00000525013 LRRC45Q96CN5 670 aa18.26■□□□□ 0.51
CAPN1-203ENST00000525013 PPP1R2P1Q96PQ5 205 aa18.26■□□□□ 0.51
CAPN1-203ENST00000525013 TAAR9Q96RI9 348 aa18.26■□□□□ 0.51
CAPN1-203ENST00000525013 KLHL3Q9UH77 587 aa18.26■□□□□ 0.51
CAPN1-203ENST00000525013 KCTD3Q9Y597 815 aa18.26■□□□□ 0.51
CAPN1-203ENST00000525013 BAHCC1Q9P281 2608 aa18.25■□□□□ 0.51
CAPN1-203ENST00000525013 ZNF106Q9H2Y7 1883 aaKnown RBP18.25■□□□□ 0.51
CAPN1-203ENST00000525013 C5orf60A6NFR6 353 aa18.25■□□□□ 0.51
CAPN1-203ENST00000525013 EFCAB7A8K855 629 aa18.25■□□□□ 0.51
CAPN1-203ENST00000525013 DDX3YO15523 660 aaKnown RBP18.25■□□□□ 0.51
CAPN1-203ENST00000525013 PRAMEF1O95521 474 aa18.25■□□□□ 0.51
CAPN1-203ENST00000525013 AKT1P31749 480 aa18.25■□□□□ 0.51
CAPN1-203ENST00000525013 SLC19A1P41440 591 aa18.25■□□□□ 0.51
CAPN1-203ENST00000525013 SPARCL1Q14515 664 aa18.25■□□□□ 0.51
CAPN1-203ENST00000525013 TAF1BQ53T94 588 aaPredicted RBP18.25■□□□□ 0.51
CAPN1-203ENST00000525013 AMZ2Q86W34 360 aa18.25■□□□□ 0.51
CAPN1-203ENST00000525013 RASGEF1AQ8N9B8 481 aa18.25■□□□□ 0.51
CAPN1-203ENST00000525013 DDHD1Q8NEL9 900 aa18.25■□□□□ 0.51
CAPN1-203ENST00000525013 ART4Q93070 314 aa18.25■□□□□ 0.51
CAPN1-203ENST00000525013 CXorf40BQ96DE9 158 aa18.25■□□□□ 0.51
CAPN1-203ENST00000525013 TBL1YQ9BQ87 522 aa18.25■□□□□ 0.51
CAPN1-203ENST00000525013 EPB41L1Q9H4G0 881 aa18.25■□□□□ 0.51
CAPN1-203ENST00000525013 OCIAD1Q9NX40 245 aa18.25■□□□□ 0.51
CAPN1-203ENST00000525013 SLC39A1Q9NY26 324 aa18.25■□□□□ 0.51
CAPN1-203ENST00000525013 ZNF624Q9P2J8 865 aaPredicted RBP18.25■□□□□ 0.51
CAPN1-203ENST00000525013 PDP2Q9P2J9 529 aa18.25■□□□□ 0.51
CAPN1-203ENST00000525013 LILRA5A6NI73 299 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 OR2AG2A6NM03 316 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 OR52A4PA6NMU1 304 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 K7ENP7 123 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 GAPDHSO14556 408 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-203ENST00000525013 POP7O75817 140 aaKnown RBP18.24■□□□□ 0.51
CAPN1-203ENST00000525013 CRTAMO95727 393 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 PRB1P04280 392 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 TYRP1P17643 537 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 MSH3P20585 1137 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 CD82P27701 267 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 CA5AP35218 305 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 CTSCP53634 463 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 RHDQ02161 417 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 MANEAQ5SRI9 462 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 INO80CQ6PI98 192 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-203ENST00000525013 TMEM220Q6QAJ8 160 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 ABRAXAS1Q6UWZ7 409 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 TMEM26Q6ZUK4 368 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 C11orf96Q7Z7L8 435 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 JPH3Q8WXH2 748 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-203ENST00000525013 PMEPA1Q969W9 287 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 B3GNT4Q9C0J1 378 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 FKBPLQ9UIM3 349 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 R3HDM2Q9Y2K5 976 aaKnown RBP18.24■□□□□ 0.51
CAPN1-203ENST00000525013 CAPN6Q9Y6Q1 641 aa18.24■□□□□ 0.51
CAPN1-203ENST00000525013 PRR19A6NJB7 356 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 ERVH48-1M5A8F1 160 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 TK2O00142 265 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 BRAFP15056 766 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 AMD1P17707 334 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 PBLDP30039 288 aaPredicted RBP18.23■□□□□ 0.51
CAPN1-203ENST00000525013 HALP42357 657 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 TMPRSS15P98073 1019 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 PDE1BQ01064 536 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 SRSF6Q13247 344 aaKnown RBP18.23■□□□□ 0.51
CAPN1-203ENST00000525013 LONRF2Q1L5Z9 754 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 FNBP1LQ5T0N5 605 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 AGAP9Q5VTM2 703 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 KIAA1614Q5VZ46 1190 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 WASH2PQ6VEQ5 465 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 DET1Q7L5Y6 550 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 VASH2Q86V25 355 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 PLXDC1Q8IUK5 500 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 RNF10Q8N5U6 811 aaKnown RBP18.23■□□□□ 0.51
CAPN1-203ENST00000525013 SNRNP27Q8WVK2 155 aaKnown RBP18.23■□□□□ 0.51
CAPN1-203ENST00000525013 HES6Q96HZ4 224 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 ASPSCR1Q9BZE9 553 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 ASB8Q9H765 288 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 UCK1Q9HA47 277 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 WASH6PQ9NQA3 447 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 SMOXQ9NWM0 555 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 GUCA1BQ9UMX6 200 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 B3GALT1Q9Y5Z6 326 aa18.23■□□□□ 0.51
CAPN1-203ENST00000525013 SMG1Q96Q15 3661 aaKnown RBP18.23■□□□□ 0.51
CAPN1-203ENST00000525013 TCRBV7S2A1N4TA0A589 114 aa18.22■□□□□ 0.51
CAPN1-203ENST00000525013 B4E171 279 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms