RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 CLPPQ16740 277 aaPredicted RBP12.36□□□□□ -0.43
VEGFA-225ENST00000523950 PERM1Q5SV97 790 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 RNASEH2BQ5TBB1 312 aaKnown RBP12.36□□□□□ -0.43
VEGFA-225ENST00000523950 HES3Q5TGS1 186 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 AGAP9Q5VTM2 703 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 CDCP2Q5VXM1 449 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 TMEM220Q6QAJ8 160 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 PACS1Q6VY07 963 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 CCNI2Q6ZMN8 369 aaPredicted RBP12.36□□□□□ -0.43
VEGFA-225ENST00000523950 AMZ2Q86W34 360 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 SERPINA9Q86WD7 417 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 KLHL7Q8IXQ5 586 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 SFRP1Q8N474 314 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 ARL14Q8N4G2 192 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 HDAC10Q969S8 669 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 CCDC74AQ96AQ1 378 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 SH3KBP1Q96B97 665 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 SERPINB12Q96P63 405 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 DEPDC7Q96QD5 511 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 TREX1Q9NSU2 369 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 SYBUQ9NX95 663 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 LRIT1Q9P2V4 623 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 TBC1D29Q9UFV1 150 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 CLCA2Q9UQC9 943 aa12.36□□□□□ -0.43
VEGFA-225ENST00000523950 C17orf113A0A1B0GUU1 675 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 MGAT4DA6NG13 374 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 SDR42E2A6NKP2 422 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 OR2AG2A6NM03 316 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 RHPN2P1A8MT19 583 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 POP7O75817 140 aaKnown RBP12.35□□□□□ -0.43
VEGFA-225ENST00000523950 AP2A2O94973 939 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 MT-CO3P00414 261 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 GOT2P00505 430 aaKnown RBP12.35□□□□□ -0.43
VEGFA-225ENST00000523950 JUPP14923 745 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 MAGEA3P43357 314 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 MAZP56270 477 aaKnown RBP12.35□□□□□ -0.43
VEGFA-225ENST00000523950 CKAP4Q07065 602 aaKnown RBP12.35□□□□□ -0.43
VEGFA-225ENST00000523950 PLA2G4EQ3MJ16 856 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 FASTKD1Q53R41 847 aaKnown RBP12.35□□□□□ -0.43
VEGFA-225ENST00000523950 FNBP1LQ5T0N5 605 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 ANKRD22Q5VYY1 191 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 IYDQ6PHW0 289 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 ABRAXAS1Q6UWZ7 409 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 TAS2R42Q7RTR8 314 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 MAATS1Q7Z4T9 603 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 SLC9B2Q86UD5 537 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 CAND1Q86VP6 1230 aaKnown RBP12.35□□□□□ -0.43
VEGFA-225ENST00000523950 JAMLQ86YT9 394 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 MPP5Q8N3R9 675 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 BEND7Q8N7W2 519 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-225ENST00000523950 DCBLD1Q8N8Z6 715 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 SPATA4Q8NEY3 305 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 OR6P1Q8NGX9 317 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 OR2L2Q8NH16 312 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 OR4L1Q8NH43 312 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 SLC37A2Q8TED4 501 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 C16orf45Q96MC5 204 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-225ENST00000523950 ZNF778Q96MU6 729 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-225ENST00000523950 OSGEPL1Q9H4B0 414 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 FAM96AQ9H5X1 160 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 SARS2Q9NP81 518 aaKnown RBP12.35□□□□□ -0.43
VEGFA-225ENST00000523950 CHRAC1Q9NRG0 131 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 SAMD15Q9P1V8 674 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 SLC23A2Q9UGH3 650 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 SLC2A6Q9UGQ3 507 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 ANAPC5Q9UJX4 755 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 KLK13Q9UKR3 277 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 RNF215Q9Y6U7 377 aa12.35□□□□□ -0.43
VEGFA-225ENST00000523950 COL27A1Q8IZC6 1860 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-225ENST00000523950 FAM237BA0A1B0GVD1 139 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 CCDC78A2IDD5 438 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 FAM187AA6NFU0 413 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 NTN3O00634 580 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-225ENST00000523950 SGTAO43765 313 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 SNX2O60749 519 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 TOP3BO95985 862 aaKnown RBP12.34□□□□□ -0.43
VEGFA-225ENST00000523950 HALP42357 657 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 TTPAP49638 278 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 CDKN1CP49918 316 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-225ENST00000523950 CRADDP78560 199 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 GPLD1P80108 840 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 B4GALNT1Q00973 533 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 SPIDRQ14159 915 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 MORF4L2Q15014 288 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 DBN1Q16643 649 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-225ENST00000523950 IZUMO3Q5VZ72 239 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 KIAA0930Q6ICG6 404 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-225ENST00000523950 RBM44Q6ZP01 1051 aaKnown RBP12.34□□□□□ -0.43
VEGFA-225ENST00000523950 ZNF572Q7Z3I7 529 aaPredicted RBP12.34□□□□□ -0.43
VEGFA-225ENST00000523950 SPRED1Q7Z699 444 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 CCNJLQ8IV13 435 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 RBM12BQ8IXT5 1001 aaKnown RBP12.34□□□□□ -0.43
VEGFA-225ENST00000523950 PIANPQ8IYJ0 282 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 BBOF1Q8ND07 529 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 HM13Q8TCT9 377 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 PATE1Q8WXA2 126 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 SGF29Q96ES7 293 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 LRRN3Q9H3W5 708 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms