RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 GLDNQ6ZMI3 551 aaPredicted RBP5.84□□□□□ -1.47
CPNE3-206ENST00000523469 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.84□□□□□ -1.47
CPNE3-206ENST00000523469 C4orf50Q6ZRC1 276 aa5.84□□□□□ -1.47
CPNE3-206ENST00000523469 SEPT14Q6ZU15 432 aa5.84□□□□□ -1.47
CPNE3-206ENST00000523469 IKBIPQ70UQ0 350 aa5.84□□□□□ -1.47
CPNE3-206ENST00000523469 RNF168Q8IYW5 571 aaPredicted RBP5.84□□□□□ -1.47
CPNE3-206ENST00000523469 USP6NLQ92738 828 aa5.84□□□□□ -1.47
CPNE3-206ENST00000523469 CTAGE1Q96RT6 745 aa5.84□□□□□ -1.47
CPNE3-206ENST00000523469 SEPT5Q99719 369 aaPredicted RBP5.84□□□□□ -1.47
CPNE3-206ENST00000523469 MTMR6Q9Y217 621 aa5.84□□□□□ -1.47
CPNE3-206ENST00000523469 LOXL2Q9Y4K0 774 aa5.84□□□□□ -1.47
CPNE3-206ENST00000523469 ANKRD36BQ8N2N9 1353 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 C4AP0C0L4 1744 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 EME2A4GXA9 379 aaPredicted RBP5.83□□□□□ -1.48
CPNE3-206ENST00000523469 SPINT2O43291 252 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 AFPP02771 609 aaKnown RBP5.83□□□□□ -1.48
CPNE3-206ENST00000523469 DPEP1P16444 411 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 UBA1P22314 1058 aaKnown RBP5.83□□□□□ -1.48
CPNE3-206ENST00000523469 HMGB2P26583 209 aaKnown RBP5.83□□□□□ -1.48
CPNE3-206ENST00000523469 PPARGP37231 505 aaPredicted RBP5.83□□□□□ -1.48
CPNE3-206ENST00000523469 CLCN3P51790 818 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 BRWD1-AS2P59051 145 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 ARF3P61204 181 aaPredicted RBP5.83□□□□□ -1.48
CPNE3-206ENST00000523469 PRAMEP78395 509 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 ARF1P84077 181 aaKnown RBP5.83□□□□□ -1.48
CPNE3-206ENST00000523469 TFAP4Q01664 338 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 COASYQ13057 564 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 SIM2Q14190 667 aaPredicted RBP5.83□□□□□ -1.48
CPNE3-206ENST00000523469 GPATCH4Q5T3I0 446 aaKnown RBP5.83□□□□□ -1.48
CPNE3-206ENST00000523469 SMIM5Q71RC9 77 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 PCDH20Q8N6Y1 951 aaKnown RBP5.83□□□□□ -1.48
CPNE3-206ENST00000523469 SMRP1Q8NCR6 262 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 OR2AK2Q8NG84 335 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 SPATA22Q8NHS9 363 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 ORAI1Q96D31 301 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 GRAMD2BQ96HH9 432 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 C1orf74Q96LT6 269 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 WWOXQ9NZC7 414 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 ACSL5Q9ULC5 683 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 VDAC3Q9Y277 283 aa5.83□□□□□ -1.48
CPNE3-206ENST00000523469 LAS1LQ9Y4W2 734 aaKnown RBP5.83□□□□□ -1.48
CPNE3-206ENST00000523469 DICER1Q9UPY3 1922 aaKnown RBP5.83□□□□□ -1.48
CPNE3-206ENST00000523469 THSD7BQ9C0I4 1608 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 SAA2-SAA4A0A096LPE2 208 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 C1orf226A1L170 272 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 GLTPD2A6NH11 291 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 ZBED4O75132 1171 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 DAB1O75553 588 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 MMP10P09238 476 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 RARGP13631 454 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 PIK3CAP42336 1068 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 PRCPP42785 496 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 RRP1P56182 461 aaKnown RBP5.82□□□□□ -1.48
CPNE3-206ENST00000523469 NAB2Q15742 525 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 DCST1Q5T197 706 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 TMEM154Q6P9G4 183 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 KLHL35Q6PF15 583 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 BEST3Q8N1M1 668 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 APBB2Q92870 758 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 TMEM19Q96HH6 336 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 NCAPGQ9BPX3 1015 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 SH2D4AQ9H788 454 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 KAT14Q9H8E8 782 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 EIF2B3Q9NR50 452 aaKnown RBP5.82□□□□□ -1.48
CPNE3-206ENST00000523469 CWC15Q9P013 229 aaKnown RBP5.82□□□□□ -1.48
CPNE3-206ENST00000523469 UBA2Q9UBT2 640 aaPredicted RBP5.82□□□□□ -1.48
CPNE3-206ENST00000523469 LTBP1Q14766 1721 aa5.82□□□□□ -1.48
CPNE3-206ENST00000523469 FAM208AQ9UK61 1670 aaKnown RBP5.82□□□□□ -1.48
CPNE3-206ENST00000523469 SMTNL1A8MU46 457 aa5.81□□□□□ -1.48
CPNE3-206ENST00000523469 MYO1GB0I1T2 1018 aa5.81□□□□□ -1.48
CPNE3-206ENST00000523469 HNRNPCL2B2RXH8 293 aa5.81□□□□□ -1.48
CPNE3-206ENST00000523469 M0QZ24 198 aa5.81□□□□□ -1.48
CPNE3-206ENST00000523469 CLGNO14967 610 aa5.81□□□□□ -1.48
CPNE3-206ENST00000523469 SNRNP70P08621 437 aaKnown RBP5.81□□□□□ -1.48
CPNE3-206ENST00000523469 MAPK4P31152 587 aa5.81□□□□□ -1.48
CPNE3-206ENST00000523469 MRPS34P82930 218 aaKnown RBP5.81□□□□□ -1.48
CPNE3-206ENST00000523469 EEF1A2Q05639 463 aaKnown RBP5.81□□□□□ -1.48
CPNE3-206ENST00000523469 CRYMQ14894 314 aa5.81□□□□□ -1.48
CPNE3-206ENST00000523469 MAPRE1Q15691 268 aaKnown RBP5.81□□□□□ -1.48
CPNE3-206ENST00000523469 DECR1Q16698 335 aa5.81□□□□□ -1.48
CPNE3-206ENST00000523469 KCNT1Q5JUK3 1230 aa5.81□□□□□ -1.48
CPNE3-206ENST00000523469 HACE1Q8IYU2 909 aa5.81□□□□□ -1.48
CPNE3-206ENST00000523469 SRBD1Q8N5C6 995 aaKnown RBP5.81□□□□□ -1.48
CPNE3-206ENST00000523469 RBMXL3Q8N7X1 1067 aaKnown RBP5.81□□□□□ -1.48
CPNE3-206ENST00000523469 SCFD2Q8WU76 684 aa5.81□□□□□ -1.48
CPNE3-206ENST00000523469 FIG4Q92562 907 aa5.81□□□□□ -1.48
CPNE3-206ENST00000523469 CMTM3Q96MX0 182 aa5.81□□□□□ -1.48
CPNE3-206ENST00000523469 CMKLR1Q99788 373 aa5.81□□□□□ -1.48
CPNE3-206ENST00000523469 TREX2Q9BQ50 279 aaPredicted RBP5.81□□□□□ -1.48
CPNE3-206ENST00000523469 CHCHD6Q9BRQ6 235 aa5.81□□□□□ -1.48
CPNE3-206ENST00000523469 SEBOXQ9HB31 216 aaPredicted RBP5.81□□□□□ -1.48
CPNE3-206ENST00000523469 OR14J1Q9UGF5 321 aa5.81□□□□□ -1.48
CPNE3-206ENST00000523469 AMDHD2Q9Y303 409 aa5.81□□□□□ -1.48
CPNE3-206ENST00000523469 NSD2O96028 1365 aa5.8□□□□□ -1.48
CPNE3-206ENST00000523469 ADGRB1O14514 1584 aa5.8□□□□□ -1.48
CPNE3-206ENST00000523469 A0A0G2JPF8 293 aa5.8□□□□□ -1.48
CPNE3-206ENST00000523469 A0A1B0GUV1 79 aa5.8□□□□□ -1.48
CPNE3-206ENST00000523469 A8MZ25 164 aa5.8□□□□□ -1.48
CPNE3-206ENST00000523469 HNRNPCL3B7ZW38 293 aa5.8□□□□□ -1.48
CPNE3-206ENST00000523469 ZNF587BE7ETH6 402 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms