RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 ACTR1BP42025 376 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 ACTR1AP61163 376 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 GPS1Q13098 491 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 OLIG2Q13516 323 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 MORF4L2Q15014 288 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 ISXQ2M1V0 245 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 TYSND1Q2T9J0 566 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 RNF187Q5TA31 235 aaPredicted RBP9.3□□□□□ -0.92
CLK4-209ENST00000521621 RD3Q7Z3Z2 195 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 TMEM135Q86UB9 458 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 TRIM74Q86UV6 250 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 CAND1Q86VP6 1230 aaKnown RBP9.3□□□□□ -0.92
CLK4-209ENST00000521621 BBOF1Q8ND07 529 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 INSM2Q96T92 566 aaPredicted RBP9.3□□□□□ -0.92
CLK4-209ENST00000521621 LRIT1Q9P2V4 623 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 TBC1D29Q9UFV1 150 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 CRLS1Q9UJA2 301 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 HEBP2Q9Y5Z4 205 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 PCNX2A6NKB5 2137 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 D6RAR5 112 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 LIN7AO14910 233 aaPredicted RBP9.3□□□□□ -0.92
CLK4-209ENST00000521621 NDUFS1P28331 727 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 ATP5DP30049 168 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 LSSP48449 732 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 POU6F1Q14863 301 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 CAPRIN2Q6IMN6 1127 aaKnown RBP9.3□□□□□ -0.92
CLK4-209ENST00000521621 ZNF449Q6P9G9 518 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 DOK6Q6PKX4 331 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 DHRS13Q6UX07 377 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 OR4D9Q8NGE8 314 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 OR4L1Q8NH43 312 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 DCUN1D1Q96GG9 259 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 TSSK1BQ9BXA7 367 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 AP1M1Q9BXS5 423 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 DPEP2Q9H4A9 486 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 EPHA6Q9UF33 1036 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 VPS9D1Q9Y2B5 631 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 CEP250Q9BV73 2442 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 MN1Q10571 1320 aaPredicted RBP9.3□□□□□ -0.92
CLK4-209ENST00000521621 SDR42E2A6NKP2 422 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 ZNF185O15231 689 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 UGT1A9O60656 530 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 POP7O75817 140 aaKnown RBP9.29□□□□□ -0.92
CLK4-209ENST00000521621 C9P02748 559 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 FTH1P02794 183 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 PAMP19021 973 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 UGT1A6P19224 532 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 UGT1A1P22309 533 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 UGT1A4P22310 534 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 AK4P27144 223 aaPredicted RBP9.29□□□□□ -0.92
CLK4-209ENST00000521621 CA5AP35218 305 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 UGT1A3P35503 534 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 UGT1A5P35504 534 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 TTPAP49638 278 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 PDX1P52945 283 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 ERVPABLB-1P60509 514 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 BASP1P80723 227 aaKnown RBP9.29□□□□□ -0.92
CLK4-209ENST00000521621 DBN1Q16643 649 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 UNQ6494/PRO21346Q6UXR6 183 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 CHST15Q7LFX5 561 aaPredicted RBP9.29□□□□□ -0.92
CLK4-209ENST00000521621 SERPINA9Q86WD7 417 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 SLITRK4Q8IW52 837 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 TTC25Q96NG3 672 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 UGT1A7Q9HAW7 530 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 UGT1A10Q9HAW8 530 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 UGT1A8Q9HAW9 530 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 SLC23A2Q9UGH3 650 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 COMMD10Q9Y6G5 202 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 ARID1BQ8NFD5 2236 aaPredicted RBP9.29□□□□□ -0.92
CLK4-209ENST00000521621 A0A1W2PQM1 296 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 CCDC162PA2VCL2 907 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 F5H423 210 aaPredicted RBP9.29□□□□□ -0.92
CLK4-209ENST00000521621 B4GAT1O43505 415 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 USP1O94782 785 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 TTC4O95801 387 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 CD9P21926 228 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 CD1CP29017 333 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 CASQ1P31415 396 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 GRIA1P42261 906 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 ARCN1P48444 511 aaKnown RBP9.29□□□□□ -0.92
CLK4-209ENST00000521621 TMEM220Q6QAJ8 160 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 CLEC14AQ86T13 490 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 SLC37A2Q8TED4 501 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 ZNF578Q96N58 590 aaPredicted RBP9.29□□□□□ -0.92
CLK4-209ENST00000521621 GFM1Q96RP9 751 aaKnown RBP9.29□□□□□ -0.92
CLK4-209ENST00000521621 FAM129AQ9BZQ8 928 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 P2RY12Q9H244 342 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 KLC4Q9NSK0 619 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 INTS10Q9NVR2 710 aaKnown RBP9.29□□□□□ -0.92
CLK4-209ENST00000521621 GULP1Q9UBP9 304 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 SSUH2Q9Y2M2 353 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 PLEKHM1Q9Y4G2 1056 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 ENTPD2Q9Y5L3 495 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 IGHV1OR21-1A0A087WYE8 117 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 CCDC187A0A096LP49 1063 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 RHPN2P1A8MT19 583 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 B4DGG1 531 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 BHMG1C9JSJ3 638 aaPredicted RBP9.29□□□□□ -0.92
CLK4-209ENST00000521621 H3BMM5 538 aa9.29□□□□□ -0.92
CLK4-209ENST00000521621 KPNA5O15131 536 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms