RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 TMEM255BQ8WV15 326 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 PHF21AQ96BD5 680 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 LINGO1Q96FE5 620 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 OXNAD1Q96HP4 312 aaPredicted RBP4.97□□□□□ -1.61
SKP1-208ENST00000521216 CEP295NLQ96MC4 621 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 GFI1Q99684 422 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 POLR3CQ9BUI4 534 aaPredicted RBP4.97□□□□□ -1.61
SKP1-208ENST00000521216 CHMP1AQ9HD42 196 aaPredicted RBP4.97□□□□□ -1.61
SKP1-208ENST00000521216 TAS2R14Q9NYV8 317 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 MARCH4Q9P2E8 410 aaPredicted RBP4.97□□□□□ -1.61
SKP1-208ENST00000521216 PLAGL1Q9UM63 463 aa4.97□□□□□ -1.61
SKP1-208ENST00000521216 EXO1Q9UQ84 846 aaKnown RBP4.97□□□□□ -1.61
SKP1-208ENST00000521216 A0A1B0GUV1 79 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 A0A1W2PP11 408 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 OR2A25A4D2G3 310 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 PLK4O00444 970 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 BMP10O95393 424 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 CETPP11597 493 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 AMD1P17707 334 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 ITGB6P18564 788 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 NMBRP28336 390 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 CTSCP53634 463 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 TERF1P54274 439 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 MVPQ14764 893 aaKnown RBP4.96□□□□□ -1.62
SKP1-208ENST00000521216 TOMM20Q15388 145 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 ZNF718Q3SXZ3 478 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 CLEC4GQ6UXB4 293 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 KCTD8Q6ZWB6 473 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 DSG4Q86SJ6 1040 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 GBGT1Q8N5D6 347 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 GCSAMQ8N6F7 178 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 C1orf52Q8N6N3 182 aaKnown RBP4.96□□□□□ -1.62
SKP1-208ENST00000521216 KBTBD3Q8NAB2 608 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 OR52I2Q8NH67 350 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 LRRC59Q96AG4 307 aaKnown RBP4.96□□□□□ -1.62
SKP1-208ENST00000521216 EPYCQ99645 322 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 TEX12Q9BXU0 123 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 OSGEPL1Q9H4B0 414 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 PDE7BQ9NP56 450 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 ABCF3Q9NUQ8 709 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 DONSONQ9NYP3 566 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 MRPL15Q9P015 296 aaKnown RBP4.96□□□□□ -1.62
SKP1-208ENST00000521216 DNAJB4Q9UDY4 337 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 LRP12Q9Y561 859 aa4.96□□□□□ -1.62
SKP1-208ENST00000521216 ZCWPW2A0A1B0GU75 182 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 A0A1W2PR77 199 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 C16orf97H3BN30 126 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 DVL1O14640 695 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 ENTPD3O75355 529 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 ZWINTO95229 277 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 ATP1A1P05023 1023 aaKnown RBP4.95□□□□□ -1.62
SKP1-208ENST00000521216 HOXB6P17509 224 aaKnown RBP4.95□□□□□ -1.62
SKP1-208ENST00000521216 BDNFP23560 247 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 MATR3P43243 847 aaKnown RBP eCLIP4.95□□□□□ -1.626e-8■■■■□ 26.1
SKP1-208ENST00000521216 DVL1P1P54792 670 aaPredicted RBP4.95□□□□□ -1.62
SKP1-208ENST00000521216 TROAPQ12815 778 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 NTRK2Q16620 822 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 ZNF672Q499Z4 452 aaPredicted RBP4.95□□□□□ -1.62
SKP1-208ENST00000521216 ALS2CLQ60I27 953 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 WBP2NLQ6ICG8 309 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 C9orf139Q6ZV77 190 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 PLEKHM3Q6ZWE6 761 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 ZNF534Q76KX8 674 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 ENOSF1Q7L5Y1 443 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 GALNT13Q8IUC8 556 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 LINC00346Q8IVM7 164 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 MCEMP1Q8IX19 187 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 MCUQ8NE86 351 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 KIFC3Q9BVG8 833 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 RTN4RQ9BZR6 473 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 TRPC7Q9HCX4 862 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 TRMT1Q9NXH9 659 aaKnown RBP4.95□□□□□ -1.62
SKP1-208ENST00000521216 RCC2Q9P258 522 aaKnown RBP4.95□□□□□ -1.62
SKP1-208ENST00000521216 HACL1Q9UJ83 578 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 FAF1Q9UNN5 650 aaPredicted RBP4.95□□□□□ -1.62
SKP1-208ENST00000521216 DLGAP4Q9Y2H0 992 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 TMEM184BQ9Y519 407 aaPredicted RBP4.95□□□□□ -1.62
SKP1-208ENST00000521216 SNX8Q9Y5X2 465 aa4.95□□□□□ -1.62
SKP1-208ENST00000521216 IFITM10A6NMD0 228 aa4.94□□□□□ -1.62
SKP1-208ENST00000521216 PRSS44E7EML9 344 aa4.94□□□□□ -1.62
SKP1-208ENST00000521216 CAPN9O14815 690 aa4.94□□□□□ -1.62
SKP1-208ENST00000521216 NDUFS4O43181 175 aa4.94□□□□□ -1.62
SKP1-208ENST00000521216 XPNPEP2O43895 674 aa4.94□□□□□ -1.62
SKP1-208ENST00000521216 AVILO75366 819 aa4.94□□□□□ -1.62
SKP1-208ENST00000521216 F7P08709 466 aaPredicted RBP4.94□□□□□ -1.62
SKP1-208ENST00000521216 ARCN1P48444 511 aaKnown RBP4.94□□□□□ -1.62
SKP1-208ENST00000521216 STAT2P52630 851 aa4.94□□□□□ -1.62
SKP1-208ENST00000521216 PNLIPRP2P54317 469 aa4.94□□□□□ -1.62
SKP1-208ENST00000521216 RUNX1T1Q06455 604 aa4.94□□□□□ -1.62
SKP1-208ENST00000521216 FAM98BQ52LJ0 330 aaKnown RBP4.94□□□□□ -1.62
SKP1-208ENST00000521216 FAM76BQ5HYJ3 339 aa4.94□□□□□ -1.62
SKP1-208ENST00000521216 PDSS1Q5T2R2 415 aa4.94□□□□□ -1.62
SKP1-208ENST00000521216 C18orf65Q6ZTR6 163 aa4.94□□□□□ -1.62
SKP1-208ENST00000521216 INTS8Q75QN2 995 aaKnown RBP4.94□□□□□ -1.62
SKP1-208ENST00000521216 DMBX1Q8NFW5 382 aa4.94□□□□□ -1.62
SKP1-208ENST00000521216 TBC1D16Q8TBP0 767 aa4.94□□□□□ -1.62
SKP1-208ENST00000521216 ZNF583Q96ND8 569 aa4.94□□□□□ -1.62
SKP1-208ENST00000521216 PKP4Q99569 1192 aa4.94□□□□□ -1.62
SKP1-208ENST00000521216 FKRPQ9H9S5 495 aa4.94□□□□□ -1.62
SKP1-208ENST00000521216 ZNF556Q9HAH1 456 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms