RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 IGHV1OR21-1A0A087WYE8 117 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 OR5K4A6NMS3 321 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 ERI2A8K979 691 aaKnown RBP13.94□□□□□ -0.18
VEGFA-221ENST00000520265 A8MU76 341 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 POP7O75817 140 aaKnown RBP13.94□□□□□ -0.18
VEGFA-221ENST00000520265 CAPNS1P04632 268 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 ITIH1P19827 911 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 CA5AP35218 305 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 FASLGP48023 281 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 KCNJ1P48048 391 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 GPLD1P80108 840 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 CDH17Q12864 832 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 EIF3IQ13347 325 aaKnown RBP13.94□□□□□ -0.18
VEGFA-221ENST00000520265 KCTD19Q17RG1 926 aaPredicted RBP13.94□□□□□ -0.18
VEGFA-221ENST00000520265 COL28A1Q2UY09 1125 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 KCTD11Q693B1 232 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 TMPRSS9Q7Z410 1059 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 ZNF438Q7Z4V0 828 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 C17orf82Q86X59 251 aaPredicted RBP13.94□□□□□ -0.18
VEGFA-221ENST00000520265 FAM129CQ86XR2 697 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 SLC35F6Q8N357 371 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 AVL9Q8NBF6 648 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 SGF29Q96ES7 293 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 LIN37Q96GY3 246 aaPredicted RBP13.94□□□□□ -0.18
VEGFA-221ENST00000520265 ZNF578Q96N58 590 aaPredicted RBP13.94□□□□□ -0.18
VEGFA-221ENST00000520265 COPS8Q99627 209 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 TBC1D10AQ9BXI6 508 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.94□□□□□ -0.18
VEGFA-221ENST00000520265 ARNT2Q9HBZ2 717 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 SARS2Q9NP81 518 aaKnown RBP13.94□□□□□ -0.18
VEGFA-221ENST00000520265 SMOXQ9NWM0 555 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 LHX6Q9UPM6 363 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 JRKLQ9Y4A0 524 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 UNC13CQ8NB66 2214 aa13.94□□□□□ -0.18
VEGFA-221ENST00000520265 OR52A4PA6NMU1 304 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 GAPDHSO14556 408 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-221ENST00000520265 LDB2O43679 373 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 TYRP1P17643 537 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 AMD1P17707 334 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 CD1CP29017 333 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 CCKBRP32239 447 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 CSF2RBP32927 897 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 RPL22P35268 128 aaKnown RBP13.93□□□□□ -0.18
VEGFA-221ENST00000520265 EIF2S3P41091 472 aaKnown RBP13.93□□□□□ -0.18
VEGFA-221ENST00000520265 SESN2P58004 480 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-221ENST00000520265 NFE2L1Q14494 772 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 KRT33BQ14525 404 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 GSE1Q14687 1217 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 PLCL1Q15111 1095 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 TRIP13Q15645 432 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-221ENST00000520265 MICALCLQ6ZW33 695 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 SNX20Q7Z614 316 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 OTUD6BQ8N6M0 293 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 GLIS1Q8NBF1 620 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 ZNF248Q8NDW4 579 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 PPHLN1Q8NEY8 458 aaKnown RBP13.93□□□□□ -0.18
VEGFA-221ENST00000520265 STYXQ8WUJ0 223 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 KCNE4Q8WWG9 221 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.93□□□□□ -0.187e-6■■■■■ 27.5
VEGFA-221ENST00000520265 MS4A14Q96JA4 679 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 AP1M1Q9BXS5 423 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 KCNF1Q9H3M0 494 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 HOMER3Q9NSC5 361 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 IMP3Q9NV31 184 aaKnown RBP13.93□□□□□ -0.18
VEGFA-221ENST00000520265 TMEM9Q9P0T7 183 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 SCHIP1Q9P0W5 487 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-221ENST00000520265 RALYQ9UKM9 306 aaKnown RBP13.93□□□□□ -0.18
VEGFA-221ENST00000520265 TTC7AQ9ULT0 858 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-221ENST00000520265 ZKSCAN5Q9Y2L8 839 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 KIF26BQ2KJY2 2108 aa13.93□□□□□ -0.18
VEGFA-221ENST00000520265 APC2O95996 2303 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 ACACAQ13085 2346 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 A0A1W2PNU3 283 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-221ENST00000520265 HEATR9A2RTY3 570 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 KLK10O43240 276 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 POLBP06746 335 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 SLC35G4P0C7Q5 338 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 PRSS56P0CW18 603 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 HOXB3P14651 431 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-221ENST00000520265 ITPKBP27987 946 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 CSTF2P33240 577 aaKnown RBP eCLIP13.92□□□□□ -0.18
VEGFA-221ENST00000520265 CDKN1CP49918 316 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-221ENST00000520265 CLCNKAP51800 687 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 ERVPABLB-1P60509 514 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 XIAPP98170 497 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 SIX1Q15475 284 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-221ENST00000520265 SKIDA1Q1XH10 827 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-221ENST00000520265 BROXQ5VW32 411 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 SERPINA9Q86WD7 417 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 NXPE1Q8N323 547 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 SNIP1Q8TAD8 396 aaKnown RBP13.92□□□□□ -0.18
VEGFA-221ENST00000520265 DTX3LQ8TDB6 740 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 JPH3Q8WXH2 748 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-221ENST00000520265 MAGOHBQ96A72 148 aaKnown RBP13.92□□□□□ -0.18
VEGFA-221ENST00000520265 PRR11Q96HE9 360 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-221ENST00000520265 ZNF514Q96K75 400 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-221ENST00000520265 PBKQ96KB5 322 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 SLC46A1Q96NT5 459 aa13.92□□□□□ -0.18
VEGFA-221ENST00000520265 NLE1Q9NVX2 485 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms