RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 MRPL40Q9NQ50 206 aaKnown RBP17.55■□□□□ 0.4
SDC2-205ENST00000520233 SLC24A2Q9UI40 661 aa17.55■□□□□ 0.4
SDC2-205ENST00000520233 MOSPD1Q9UJG1 213 aa17.55■□□□□ 0.4
SDC2-205ENST00000520233 PNMA8BQ9ULN7 279 aaPredicted RBP17.55■□□□□ 0.4
SDC2-205ENST00000520233 SUFUQ9UMX1 484 aa17.55■□□□□ 0.4
SDC2-205ENST00000520233 SLC6A14Q9UN76 642 aa17.55■□□□□ 0.4
SDC2-205ENST00000520233 DNMT3AQ9Y6K1 912 aaPredicted RBP17.55■□□□□ 0.4
SDC2-205ENST00000520233 IKBKGQ9Y6K9 419 aa17.55■□□□□ 0.4
SDC2-205ENST00000520233 DGKBQ9Y6T7 804 aa17.55■□□□□ 0.4
SDC2-205ENST00000520233 KMOO15229 486 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 RASGRP1O95267 797 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 TNFP01375 233 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 CFIP05156 583 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 RETP07949 1114 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 CTSKP43235 329 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 ABCG1P45844 678 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 SERPINB9P50453 376 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 BNC1Q01954 994 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 KIF19Q2TAC6 998 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 ADGRD1Q6QNK2 874 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 GALNT13Q8IUC8 556 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 TRAPPC5Q8IUR0 188 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 ZNF547Q8IVP9 402 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 IQCKQ8N0W5 287 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 NAT14Q8WUY8 206 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 DCAKDQ8WVC6 231 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 TSACCQ96A04 125 aaPredicted RBP17.54■□□□□ 0.4
SDC2-205ENST00000520233 PDXPQ96GD0 296 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 VPS39Q96JC1 886 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 LINC00615Q96LM1 132 aaPredicted RBP17.54■□□□□ 0.4
SDC2-205ENST00000520233 TSSK1BQ9BXA7 367 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 ERVMER34-1Q9H9K5 563 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 CARS2Q9HA77 564 aaKnown RBP17.54■□□□□ 0.4
SDC2-205ENST00000520233 ZNHIT2Q9UHR6 403 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 NFS1Q9Y697 457 aa17.54■□□□□ 0.4
SDC2-205ENST00000520233 FTH1P02794 183 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 CSF2P04141 144 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 GSTM1P09488 218 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 GNPDA1P46926 289 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 BLKP51451 505 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 HK3P52790 923 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 GSTM4Q03013 218 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 IFFO1Q0D2I5 559 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 TRIM61Q5EBN2 209 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 PLA2G2CQ5R387 149 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 FAM45BPQ6NSW5 357 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 CRTC3Q6UUV7 619 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 RD3Q7Z3Z2 195 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 C11orf96Q7Z7L8 435 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 TDRPQ86YL5 185 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 HID1Q8IV36 788 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 PHACTR4Q8IZ21 702 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 CNPY4Q8N129 248 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 OR2W6PQ8NHA6 318 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 FAM45AQ8TCE6 357 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 ATXN7L3BQ96GX2 97 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 PANX3Q96QZ0 392 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 OR2M4Q96R27 311 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 TMEM109Q9BVC6 243 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 ROPN1BQ9BZX4 212 aaPredicted RBP17.53■□□□□ 0.4
SDC2-205ENST00000520233 ROPN1Q9HAT0 212 aaPredicted RBP17.53■□□□□ 0.4
SDC2-205ENST00000520233 MTO1Q9Y2Z2 717 aaKnown RBP17.53■□□□□ 0.4
SDC2-205ENST00000520233 HCN4Q9Y3Q4 1203 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 PRKAB1Q9Y478 270 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 PCYT1BQ9Y5K3 369 aaPredicted RBP17.53■□□□□ 0.4
SDC2-205ENST00000520233 SNX11Q9Y5W9 270 aa17.53■□□□□ 0.4
SDC2-205ENST00000520233 FAM95CA0A1B0GW59 222 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 KLHL33A6NCF5 533 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 PATE3B3GLJ2 98 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 KCNJ13O60928 360 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 POP7O75817 140 aaKnown RBP17.52■□□□□ 0.4
SDC2-205ENST00000520233 ITGA2BP08514 1039 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 NME1P15531 152 aaKnown RBP17.52■□□□□ 0.4
SDC2-205ENST00000520233 CD9P21926 228 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 CNTFP26441 200 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 CASP8Q14790 479 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 RASA2Q15283 850 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 RBM20Q5T481 1227 aaKnown RBP17.52■□□□□ 0.4
SDC2-205ENST00000520233 LGSNQ5TDP6 509 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 HECTD2Q5U5R9 776 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 LRIG3Q6UXM1 1119 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 TAOK1Q7L7X3 1001 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 OXR1Q8N573 874 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 BEND7Q8N7W2 519 aaPredicted RBP17.52■□□□□ 0.4
SDC2-205ENST00000520233 GPATCH11Q8N954 259 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 KCNJ9Q92806 393 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 ELMO2Q96JJ3 720 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 NDNQ99608 321 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 GPR22Q99680 433 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 CCM2Q9BSQ5 444 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 NUSAP1Q9BXS6 441 aaKnown RBP17.52■□□□□ 0.4
SDC2-205ENST00000520233 ZDHHC5Q9C0B5 715 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 LATS2Q9NRM7 1088 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 FAM86C1Q9NVL1 165 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 TRNAU1APQ9NX07 287 aaKnown RBP17.52■□□□□ 0.4
SDC2-205ENST00000520233 DNAJC28Q9NX36 388 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 PSMC3IPQ9P2W1 217 aaPredicted RBP17.52■□□□□ 0.4
SDC2-205ENST00000520233 KLF15Q9UIH9 416 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 GMEB2Q9UKD1 530 aa17.52■□□□□ 0.4
SDC2-205ENST00000520233 MED16Q9Y2X0 877 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms