RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 FAM169AQ9Y6X4 670 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 BCORL1Q5H9F3 1711 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 KIF21BO75037 1637 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 ARHGAP5Q13017 1502 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 PTPRKQ15262 1439 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 NCOA1Q15788 1441 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 CGNL1Q0VF96 1302 aa3.18□□□□□ -1.9
HERC4-215ENST00000515753 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 REREQ9P2R6 1566 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 PLA2R1Q13018 1463 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 CCDC18Q5T9S5 1454 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 CCNB3Q8WWL7 1395 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 PRR23AA6NEV1 266 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 PRAC2D3DTV9 90 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 BMPR1BO00238 502 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 PAGE4O60829 102 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 AFPP02771 609 aaKnown RBP3.17□□□□□ -1.9
HERC4-215ENST00000515753 SAT1P21673 171 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 DGKAP23743 735 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 GCH1P30793 250 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 HOXC9P31274 260 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 EIF2S3P41091 472 aaKnown RBP3.17□□□□□ -1.9
HERC4-215ENST00000515753 GARSP41250 739 aaKnown RBP3.17□□□□□ -1.9
HERC4-215ENST00000515753 TNNT3P45378 269 aaPredicted RBP3.17□□□□□ -1.9
HERC4-215ENST00000515753 CTCFP49711 727 aaPredicted RBP3.17□□□□□ -1.9
HERC4-215ENST00000515753 GNAQP50148 359 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 OLR1P78380 273 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 TFCP2Q12800 502 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 AIMP1Q12904 312 aaKnown RBP3.17□□□□□ -1.9
HERC4-215ENST00000515753 ZBTB17Q13105 803 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 NAE1Q13564 534 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 CTF1Q16619 201 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 NTRK2Q16620 822 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 RAB41Q5JT25 222 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 TRNP1Q6NT89 227 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 CDC73Q6P1J9 531 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 KLHL35Q6PF15 583 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 C11orf88Q6PI97 169 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 FBXO46Q6PJ61 603 aaPredicted RBP3.17□□□□□ -1.9
HERC4-215ENST00000515753 IL27RAQ6UWB1 636 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 PQLC2Q6ZP29 291 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 FOXL2NBQ6ZUU3 175 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 ZNF771Q7L3S4 317 aaPredicted RBP3.17□□□□□ -1.9
HERC4-215ENST00000515753 CACNA2D4Q7Z3S7 1137 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 SLFN11Q7Z7L1 901 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 SMIM29Q86T20 159 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 CNTROBQ8N137 903 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 SPATA6LQ8N4H0 392 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 ZNF713Q8N859 430 aaPredicted RBP3.17□□□□□ -1.9
HERC4-215ENST00000515753 ZNF441Q8N8Z8 693 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 KCNH5Q8NCM2 988 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 SECTM1Q8WVN6 248 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 FIG4Q92562 907 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 SMARCE1Q969G3 411 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 INTS12Q96CB8 462 aaKnown RBP3.17□□□□□ -1.9
HERC4-215ENST00000515753 TMEM19Q96HH6 336 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 PGAM5Q96HS1 289 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 C3orf30Q96M34 536 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 JAKMIP1Q96N16 626 aaKnown RBP3.17□□□□□ -1.9
HERC4-215ENST00000515753 MAP7D2Q96T17 732 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 KXD1Q9BQD3 176 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 TMEM47Q9BQJ4 181 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 SH2D4AQ9H788 454 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 PPP1R3EQ9H7J1 279 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 KAT14Q9H8E8 782 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 PDE7BQ9NP56 450 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 SLC6A13Q9NSD5 602 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 TMEM30AQ9NV96 361 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 DONSONQ9NYP3 566 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 SUCLA2Q9P2R7 463 aaPredicted RBP3.17□□□□□ -1.9
HERC4-215ENST00000515753 RCOR1Q9UKL0 485 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 INTS6Q9UL03 887 aaKnown RBP3.17□□□□□ -1.9
HERC4-215ENST00000515753 AMDHD2Q9Y303 409 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 SNX9Q9Y5X1 595 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 SNX5Q9Y5X3 404 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 HECW1Q76N89 1606 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 MADDQ8WXG6 1647 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 RTEL1-TNFRSF6BF6WH68 1400 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 CASKIN1Q8WXD9 1431 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 TTC37Q6PGP7 1564 aa3.17□□□□□ -1.9
HERC4-215ENST00000515753 MTUS2Q5JR59 1369 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 DHX29Q7Z478 1369 aaKnown RBP3.16□□□□□ -1.9
HERC4-215ENST00000515753 A0A1W2PQ09 198 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 LILRA5A6NI73 299 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 GLOD5A6NK44 160 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 A8MZ25 164 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 HNRNPCL2B2RXH8 293 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 H0Y626 953 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 IFNL4K9M1U5 179 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 OR2C1O95371 312 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 SP1P08047 785 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 S1PR1P21453 382 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 ANOS1P23352 680 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 ATP5DP30049 168 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 ICAM3P32942 547 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 RBP5P82980 135 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 TMEM115Q12893 351 aaPredicted RBP3.16□□□□□ -1.9
HERC4-215ENST00000515753 BFSP1Q12934 665 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 DRAP1Q14919 205 aaPredicted RBP3.16□□□□□ -1.9
HERC4-215ENST00000515753 MED22Q15528 200 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms