RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 RSPH14Q9UHP6 348 aa13.09□□□□□ -0.31
PFDN1-206ENST00000514611 HEMK1Q9Y5R4 338 aaPredicted RBP13.09□□□□□ -0.31
PFDN1-206ENST00000514611 TENM4Q6N022 2769 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 COL6A6A6NMZ7 2263 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 GAPDHSO14556 408 aaPredicted RBP13.08□□□□□ -0.32
PFDN1-206ENST00000514611 POLR1CO15160 346 aaPredicted RBP13.08□□□□□ -0.32
PFDN1-206ENST00000514611 CAPN5O15484 640 aaPredicted RBP13.08□□□□□ -0.32
PFDN1-206ENST00000514611 UGT1A9O60656 530 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 ZRANB2O95218 330 aaKnown RBP eCLIP13.08□□□□□ -0.32
PFDN1-206ENST00000514611 LCA5LO95447 670 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 DLGAP3O95886 979 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 PRKAR1AP10644 381 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 ZNF28P17035 718 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 AMD1P17707 334 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 UGT1A6P19224 532 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 UGT1A1P22309 533 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 UGT1A4P22310 534 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 CAPZBP47756 277 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 PPP1CAP62136 330 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 SH3BP2P78314 561 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 FOXM1Q08050 763 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 OLIG2Q13516 323 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 GPR18Q14330 331 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 PTPRCAPQ14761 206 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 C11orf63Q6NUN7 778 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 BORAQ6PGQ7 559 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 ABRAXAS1Q6UWZ7 409 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 NAT14Q8WUY8 206 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 CXorf40BQ96DE9 158 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 HEMGNQ9BXL5 484 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 GPN2Q9H9Y4 310 aaPredicted RBP13.08□□□□□ -0.32
PFDN1-206ENST00000514611 UGT1A7Q9HAW7 530 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 UGT1A10Q9HAW8 530 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 UGT1A8Q9HAW9 530 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 TMEM184BQ9Y519 407 aaPredicted RBP13.08□□□□□ -0.32
PFDN1-206ENST00000514611 PCDHA13Q9Y5I0 950 aa13.08□□□□□ -0.32
PFDN1-206ENST00000514611 GLYATL1P3A0A0U1RQE8 302 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 MACROD2A1Z1Q3 448 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 OR2AG2A6NM03 316 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 ZNF891A8MT65 544 aaPredicted RBP13.07□□□□□ -0.32
PFDN1-206ENST00000514611 NKX2-8O15522 239 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 MTSS1O43312 755 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 KIF1CO43896 1103 aaKnown RBP13.07□□□□□ -0.32
PFDN1-206ENST00000514611 RASSF9O75901 435 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 EPOP01588 193 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 HLA-DPA1P20036 260 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 IDSP22304 550 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 MAP4P27816 1152 aaKnown RBP13.07□□□□□ -0.32
PFDN1-206ENST00000514611 RBL1P28749 1068 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 PBLDP30039 288 aaPredicted RBP13.07□□□□□ -0.32
PFDN1-206ENST00000514611 TNNT3P45378 269 aaPredicted RBP13.07□□□□□ -0.32
PFDN1-206ENST00000514611 POLE2P56282 527 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 MPP3Q13368 585 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 PPP2R5EQ16537 467 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 GPRC6AQ5T6X5 926 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 AGAP9Q5VTM2 703 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 SARM1Q6SZW1 724 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 XKR5Q6UX68 686 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 FAM83HQ6ZRV2 1179 aaPredicted RBP13.07□□□□□ -0.32
PFDN1-206ENST00000514611 FAM92BQ6ZTR7 304 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 BBS12Q6ZW61 710 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 RCOR2Q8IZ40 523 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 RASGEF1AQ8N9B8 481 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 DDHD1Q8NEL9 900 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 RBM41Q96IZ5 413 aaKnown RBP13.07□□□□□ -0.32
PFDN1-206ENST00000514611 SLC45A3Q96JT2 553 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 VAT1Q99536 393 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 FAM118BQ9BPY3 351 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 ZPBPQ9BS86 351 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 FICDQ9BVA6 458 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 FSD1LQ9BXM9 530 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 TRIM5Q9C035 493 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 GBA3Q9H227 469 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 ZNF768Q9H5H4 540 aaKnown RBP13.07□□□□□ -0.32
PFDN1-206ENST00000514611 SLC40A1Q9NP59 571 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 GEMIN8Q9NWZ8 242 aaKnown RBP13.07□□□□□ -0.32
PFDN1-206ENST00000514611 IL17BQ9UHF5 180 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 MRPS18BQ9Y676 258 aaKnown RBP13.07□□□□□ -0.32
PFDN1-206ENST00000514611 ARL5AQ9Y689 179 aa13.07□□□□□ -0.32
PFDN1-206ENST00000514611 PIEZO2Q9H5I5 2752 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 RCCD1A6NED2 376 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 SOWAHDA6NJG2 315 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 HACD1B0YJ81 288 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 H7C0C1 242 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 APOC4-APOC2K7ER74 178 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 PPFIA2O75334 1257 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 PRAMEF1O95521 474 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 AGTP01019 485 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 APOC2P02655 101 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 VCLP18206 1134 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 OAS2P29728 719 aaKnown RBP13.06□□□□□ -0.32
PFDN1-206ENST00000514611 STAT5AP42229 794 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 ATP5OP48047 213 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 ABHD18Q0P651 414 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 CDC20Q12834 499 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 NFE2L1Q14494 772 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 ATP1A1-AS1Q5TC04 95 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 IRGCQ6NXR0 463 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 WASH2PQ6VEQ5 465 aa13.06□□□□□ -0.32
PFDN1-206ENST00000514611 DET1Q7L5Y6 550 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms