RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 TMCO6Q96DC7 493 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 SLC22A12Q96S37 553 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 CDRT15Q96T59 188 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 C1QTNF4Q9BXJ3 329 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 SLCO5A1Q9H2Y9 848 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 C6orf106Q9H6K1 298 aaPredicted RBP4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 EBF2Q9HAK2 575 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 KLHL1Q9NR64 748 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 PSD3Q9NYI0 1048 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 RCC2Q9P258 522 aaKnown RBP4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 HACL1Q9UJ83 578 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 RALYQ9UKM9 306 aaKnown RBP4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 ZNF148Q9UQR1 794 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 PCDHAC2Q9Y5I4 1007 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 FAM169AQ9Y6X4 670 aa4.98□□□□□ -1.61
HMGCS1-207ENST00000514610 SAA2-SAA4A0A096LPE2 208 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 GPR75-ASB3A0A0A6YYF3 556 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 OR5K3A6NET4 321 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 TULP2O00295 520 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 CCKBRP32239 447 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 KRT20P35900 424 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 FUT6P51993 359 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 COASYQ13057 564 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 BAATQ14032 418 aaPredicted RBP4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 STXBP5Q5T5C0 1151 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 MFSD4BQ5TF39 518 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 HAUS6Q7Z4H7 955 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 LDB1Q86U70 411 aaPredicted RBP4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 ADIPOR2Q86V24 386 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 APPL2Q8NEU8 664 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 OR52I2Q8NH67 350 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 LNX1Q8TBB1 728 aaPredicted RBP4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 DNAAF4Q8WXU2 420 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 SORCS1Q8WY21 1168 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 ZNF622Q969S3 477 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 TTC14Q96N46 770 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 MEIS3Q99687 375 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 SYT17Q9BSW7 474 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 SPATC1LQ9H0A9 340 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 UBTD1Q9HAC8 227 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 MBNL1Q9NR56 388 aaKnown RBP4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 LARSQ9P2J5 1176 aaKnown RBP4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 POLG2Q9UHN1 485 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 DLGAP4Q9Y2H0 992 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 WBP11Q9Y2W2 641 aaKnown RBP4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 PCDHGB1Q9Y5G3 927 aa4.97□□□□□ -1.61
HMGCS1-207ENST00000514610 IGHV4OR15-8A0A075B7B6 117 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 ZCWPW2A0A1B0GU75 182 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 PLSCR5A0PG75 271 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 OR2M5A3KFT3 312 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 C5orf60A6NFR6 353 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 CLGNO14967 610 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 ZBTB43O43298 467 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 ZWINTO95229 277 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 BCL10O95999 233 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 DNTTP04053 509 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 CDH1P12830 882 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 POLR2CP19387 275 aaPredicted RBP4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 GNL1P36915 607 aaPredicted RBP4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 USP8P40818 1118 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 CTSCP53634 463 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 EEF1A2Q05639 463 aaKnown RBP4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 GTF2H2Q13888 395 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 IZUMO4Q1ZYL8 232 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 C15orf59Q2T9L4 293 aaPredicted RBP4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 LCE1AQ5T7P2 110 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 ZDHHC20Q5W0Z9 365 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 GPR139Q6DWJ6 353 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 GTF2H2CQ6P1K8 395 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 TEX38Q6PEX7 206 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 TMCO3Q6UWJ1 677 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 DENND5BQ6ZUT9 1274 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 INTS8Q75QN2 995 aaKnown RBP4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 SFR1Q86XK3 245 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 KMT5CQ86Y97 462 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 GUF1Q8N442 669 aaKnown RBP4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 TBC1D16Q8TBP0 767 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 CDCA5Q96FF9 252 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 IL17FQ96PD4 163 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 APOL6Q9BWW8 343 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 SEMA6AQ9H2E6 1030 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 LRMDAQ9H2I8 198 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 KCNK15Q9H427 330 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 MARCH4Q9P2E8 410 aaPredicted RBP4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 CPSF2Q9P2I0 782 aaKnown RBP4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 MORF4L1Q9UBU8 362 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 AMACRQ9UHK6 382 aa4.96□□□□□ -1.62
HMGCS1-207ENST00000514610 LOC100509620A0A075B734 347 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 MAGEB17A8MXT2 336 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 PRAC2D3DTV9 90 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 EIF3DO15371 548 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 NDUFS4O43181 175 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 ZNHIT1O43257 154 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 PLOD3O60568 738 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 WDR1O75083 606 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 CSPG5O95196 566 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 CENPBP07199 599 aaPredicted RBP4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 FAM106CPP0CH98 169 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 FGF3P11487 239 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms