RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 ALG1LQ6GMV1 187 aa9.99□□□□□ -0.81
DDR1-276ENST00000514534 TIGD7Q6NT04 549 aaPredicted RBP9.99□□□□□ -0.81
DDR1-276ENST00000514534 ZNF517Q6ZMY9 492 aaPredicted RBP9.99□□□□□ -0.81
DDR1-276ENST00000514534 POLNQ7Z5Q5 900 aa9.99□□□□□ -0.81
DDR1-276ENST00000514534 CISD2Q8N5K1 135 aaKnown RBP9.99□□□□□ -0.81
DDR1-276ENST00000514534 ENDOVQ8N8Q3 282 aaKnown RBP9.99□□□□□ -0.81
DDR1-276ENST00000514534 LPCAT1Q8NF37 534 aa9.99□□□□□ -0.81
DDR1-276ENST00000514534 NEK11Q8NG66 645 aa9.99□□□□□ -0.81
DDR1-276ENST00000514534 SGSM3Q96HU1 749 aa9.99□□□□□ -0.81
DDR1-276ENST00000514534 PCMTD1Q96MG8 357 aaPredicted RBP9.99□□□□□ -0.81
DDR1-276ENST00000514534 LRFN5Q96NI6 719 aa9.99□□□□□ -0.81
DDR1-276ENST00000514534 CD180Q99467 661 aa9.99□□□□□ -0.81
DDR1-276ENST00000514534 ZSCAN5AQ9BUG6 496 aa9.99□□□□□ -0.81
DDR1-276ENST00000514534 TUBB2BQ9BVA1 445 aa9.99□□□□□ -0.81
DDR1-276ENST00000514534 SPATA16Q9BXB7 569 aa9.99□□□□□ -0.81
DDR1-276ENST00000514534 PCDH9Q9HC56 1237 aa9.99□□□□□ -0.81
DDR1-276ENST00000514534 RAD18Q9NS91 495 aa9.99□□□□□ -0.81
DDR1-276ENST00000514534 KCND1Q9NSA2 647 aa9.99□□□□□ -0.81
DDR1-276ENST00000514534 AMACRQ9UHK6 382 aa9.99□□□□□ -0.81
DDR1-276ENST00000514534 B3GNT3Q9Y2A9 372 aa9.99□□□□□ -0.81
DDR1-276ENST00000514534 UBA6A0AVT1 1052 aaPredicted RBP9.98□□□□□ -0.81
DDR1-276ENST00000514534 HEATR9A2RTY3 570 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 TMEM191CA6NGB0 347 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 TLCD2A6NGC4 264 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 A6NL46 340 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 OR52A4PA6NMU1 304 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 EPHB6O15197 1021 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 VEGFDO43915 354 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 ALPPP05187 535 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 RPL10P27635 214 aaKnown RBP9.98□□□□□ -0.81
DDR1-276ENST00000514534 HSD11B2P80365 405 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 GPS2Q13227 327 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 KCNAB1Q14722 419 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 DPCR1Q3MIW9 517 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 PLEKHN1Q494U1 663 aaPredicted RBP9.98□□□□□ -0.81
DDR1-276ENST00000514534 BOLA3Q53S33 107 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 CT47A1Q5JQC4 288 aaPredicted RBP9.98□□□□□ -0.81
DDR1-276ENST00000514534 CYP4V2Q6ZWL3 525 aaPredicted RBP9.98□□□□□ -0.81
DDR1-276ENST00000514534 ADGRG6Q86SQ4 1221 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 RAB43Q86YS6 212 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 D2HGDHQ8N465 521 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 CPT1BQ92523 772 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 TM9SF4Q92544 642 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 CSPG4P5Q96PW8 444 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 MAP3K3Q99759 626 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 MLPHQ9BV36 600 aaPredicted RBP9.98□□□□□ -0.81
DDR1-276ENST00000514534 NLNQ9BYT8 704 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 ILKAPQ9H0C8 392 aaPredicted RBP9.98□□□□□ -0.81
DDR1-276ENST00000514534 CHST8Q9H2A9 424 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 FANCEQ9HB96 536 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 LATS2Q9NRM7 1088 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 AGPAT4Q9NRZ5 378 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 ETNK2Q9NVF9 386 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 TCFL5Q9UL49 500 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 TTLL3Q9Y4R7 772 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 COPG1Q9Y678 874 aaKnown RBP9.98□□□□□ -0.81
DDR1-276ENST00000514534 CROCCQ5TZA2 2017 aa9.98□□□□□ -0.81
DDR1-276ENST00000514534 POLEQ07864 2286 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 ARHGAP10A1A4S6 786 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 ANKRD66B4E2M5 251 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 KCNJ13O60928 360 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 IPO13O94829 963 aaKnown RBP9.97□□□□□ -0.81
DDR1-276ENST00000514534 CDK14O94921 469 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 PRLP01236 227 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 IGHEP01854 428 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 BRAFP15056 766 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 FERP16591 822 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 FECHP22830 423 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 GRNP28799 593 aaKnown RBP9.97□□□□□ -0.81
DDR1-276ENST00000514534 PCK1P35558 622 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 ZNF165P49910 485 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 DCDC1P59894 354 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 PPP1CAP62136 330 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 DSC2Q02487 901 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 GTF2H3Q13889 308 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 PLCL1Q15111 1095 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 KRT31Q15323 416 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 SMTNL2Q2TAL5 461 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 DNTTIP2Q5QJE6 756 aaKnown RBP9.97□□□□□ -0.81
DDR1-276ENST00000514534 ZNF648Q5T619 568 aaPredicted RBP9.97□□□□□ -0.81
DDR1-276ENST00000514534 DSELQ8IZU8 1212 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 TRAM1L1Q8N609 369 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 ST6GALNAC3Q8NDV1 305 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 HSPH1Q92598 858 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 GLYATL1Q969I3 302 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 ZNF501Q96CX3 271 aaPredicted RBP9.97□□□□□ -0.81
DDR1-276ENST00000514534 FER1L6-AS2Q96M78 137 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 IP6K3Q96PC2 410 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 ADGRE3Q9BY15 652 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 ZFYVE1Q9HBF4 777 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 SYTL2Q9HCH5 934 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 ARFGAP3Q9NP61 516 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 RBM22Q9NW64 420 aaKnown RBP eCLIP9.97□□□□□ -0.81
DDR1-276ENST00000514534 NFKBIL1Q9UBC1 381 aaPredicted RBP9.97□□□□□ -0.81
DDR1-276ENST00000514534 SLC23A2Q9UGH3 650 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 PADI2Q9Y2J8 665 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 SCINQ9Y6U3 715 aa9.97□□□□□ -0.81
DDR1-276ENST00000514534 MDC1Q14676 2089 aaKnown RBP9.97□□□□□ -0.81
DDR1-276ENST00000514534 PRRC2CQ9Y520 2896 aaKnown RBP9.96□□□□□ -0.81
DDR1-276ENST00000514534 OR5K3A6NET4 321 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms