RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 PMM2O15305 246 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 ACSL4O60488 711 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 NBNO60934 754 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 KCNH1O95259 989 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 AP2A1O95782 977 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 L1CAMP32004 1257 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 S100A3P33764 101 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 GPR15P49685 360 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 RBM48Q5RL73 367 aaKnown RBP13.02□□□□□ -0.32
TCOF1-213ENST00000514442 CCDC28AQ8IWP9 274 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 ASCC1Q8N9N2 400 aaKnown RBP13.02□□□□□ -0.32
TCOF1-213ENST00000514442 FBXO22Q8NEZ5 403 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 AHSPQ9NZD4 102 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 DTLQ9NZJ0 730 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 TMEM216Q9P0N5 145 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 FBXW11Q9UKB1 542 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 RWDD3Q9Y3V2 267 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 PCDHGC4Q9Y5F7 938 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 COPG1Q9Y678 874 aaKnown RBP13.02□□□□□ -0.32
TCOF1-213ENST00000514442 AHDC1Q5TGY3 1603 aaPredicted RBP13.02□□□□□ -0.32
TCOF1-213ENST00000514442 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.02□□□□□ -0.32
TCOF1-213ENST00000514442 KRBA1A5PL33 1030 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 CENPBD1B2RD01 187 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 TFECO14948 347 aaPredicted RBP13.02□□□□□ -0.32
TCOF1-213ENST00000514442 FGBP02675 491 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 LINC00032P0C843 101 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 IVDP26440 423 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 RFX4Q33E94 735 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 MZT2BQ6NZ67 158 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 GET4Q7L5D6 327 aaPredicted RBP13.02□□□□□ -0.32
TCOF1-213ENST00000514442 UBE2Q1Q7Z7E8 422 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 BBS7Q8IWZ6 715 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 FBXO30Q8TB52 745 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 PSMG2Q969U7 264 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 GMPPBQ9Y5P6 360 aa13.02□□□□□ -0.32
TCOF1-213ENST00000514442 STBD1O95210 358 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 FADS2O95864 444 aaKnown RBP13.02□□□□□ -0.33
TCOF1-213ENST00000514442 EOMESO95936 686 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 UMPSP11172 480 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 COX7A2P14406 83 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 TCEA1P23193 301 aaKnown RBP13.02□□□□□ -0.33
TCOF1-213ENST00000514442 CYP2A13Q16696 494 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 MSS51Q4VC12 460 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 ANKRD13BQ86YJ7 626 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 SACM1LQ9NTJ5 587 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 FBXL21Q9UKT6 434 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 TMCC3Q9ULS5 477 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 LAMB4A4D0S4 1761 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 NPEPPSL1A6NEC2 478 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 CST1P01037 141 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 CENPAP49450 140 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 PURAQ00577 322 aaKnown RBP13.02□□□□□ -0.33
TCOF1-213ENST00000514442 RHDQ02161 417 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 FBXO48Q5FWF7 155 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 TAS1R3Q7RTX0 852 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 UNC5BQ8IZJ1 945 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 AADATQ8N5Z0 425 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 AZIN2Q96A70 460 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 SLC45A1Q9Y2W3 748 aa13.02□□□□□ -0.33
TCOF1-213ENST00000514442 SLC38A8A6NNN8 435 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 H0Y858 1186 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 STX16-NPEPL1H3BU86 382 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 EI24O14681 340 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 CCNCP24863 283 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 PIK3CGP48736 1102 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 EPGNQ6UW88 154 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 AUTS2Q8WXX7 1259 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 TBATAQ96M53 351 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 TSEN34Q9BSV6 310 aaKnown RBP13.01□□□□□ -0.33
TCOF1-213ENST00000514442 OR2B2Q9GZK3 357 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 KCNK13Q9HB14 408 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 ATP6V1HQ9UI12 483 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 FCF1Q9Y324 198 aaKnown RBP13.01□□□□□ -0.33
TCOF1-213ENST00000514442 ALS2Q96Q42 1657 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 MYH6P13533 1939 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 TCRBV7S3A2A0A539 114 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 CAPN14A8MX76 684 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 NRP1O14786 923 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 CYP7B1O75881 506 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 RGS20O76081 388 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 GSTM1P09488 218 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 HGFP14210 728 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 NMBRP28336 390 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 HNF4AP41235 474 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 WASP42768 502 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 ANXA11P50995 505 aaKnown RBP13.01□□□□□ -0.33
TCOF1-213ENST00000514442 RPL38P63173 70 aaKnown RBP13.01□□□□□ -0.33
TCOF1-213ENST00000514442 ZNF773Q6PK81 442 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 FAM124AQ86V42 546 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 C7orf61Q8IZ16 206 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 C12orf4Q9NQ89 552 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 LEF1Q9UJU2 399 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-213ENST00000514442 CPQQ9Y646 472 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 C1QTNF3-AMACRE9PGA6 284 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 GCATO75600 419 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 FYNP06241 537 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 ALDH4A1P30038 563 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 ARL13AQ5H913 290 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-213ENST00000514442 HECTD2Q5U5R9 776 aa13.01□□□□□ -0.33
TCOF1-213ENST00000514442 MBLAC2Q68D91 279 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms