RNA–Protein interactions for RNA: ENST00000514434.1

DDR1-275, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-275ENST00000514434 CLCNKAP51800 687 aa12.85□□□□□ -0.35
DDR1-275ENST00000514434 CTSCP53634 463 aa12.85□□□□□ -0.35
DDR1-275ENST00000514434 GDF10P55107 478 aa12.85□□□□□ -0.35
DDR1-275ENST00000514434 KLF1Q13351 362 aaPredicted RBP12.85□□□□□ -0.35
DDR1-275ENST00000514434 ITGA9Q13797 1035 aa12.85□□□□□ -0.35
DDR1-275ENST00000514434 CLPPQ16740 277 aaPredicted RBP12.85□□□□□ -0.35
DDR1-275ENST00000514434 LDLRAP1Q5SW96 308 aa12.85□□□□□ -0.35
DDR1-275ENST00000514434 TMEM71Q6P5X7 295 aa12.85□□□□□ -0.35
DDR1-275ENST00000514434 MICALCLQ6ZW33 695 aa12.85□□□□□ -0.35
DDR1-275ENST00000514434 FAM129CQ86XR2 697 aa12.85□□□□□ -0.35
DDR1-275ENST00000514434 RNF10Q8N5U6 811 aaKnown RBP12.85□□□□□ -0.35
DDR1-275ENST00000514434 OR13C4Q8NGS5 318 aa12.85□□□□□ -0.35
DDR1-275ENST00000514434 BRSK1Q8TDC3 778 aa12.85□□□□□ -0.35
DDR1-275ENST00000514434 JPH3Q8WXH2 748 aaPredicted RBP12.85□□□□□ -0.35
DDR1-275ENST00000514434 PMEPA1Q969W9 287 aa12.85□□□□□ -0.35
DDR1-275ENST00000514434 TIMM29Q9BSF4 260 aa12.85□□□□□ -0.35
DDR1-275ENST00000514434 TSGA10Q9BZW7 698 aa12.85□□□□□ -0.35
DDR1-275ENST00000514434 ZCCHC2Q9C0B9 1178 aaKnown RBP12.85□□□□□ -0.35
DDR1-275ENST00000514434 FAM96AQ9H5X1 160 aa12.85□□□□□ -0.35
DDR1-275ENST00000514434 ASB8Q9H765 288 aa12.85□□□□□ -0.35
DDR1-275ENST00000514434 PIH1D1Q9NWS0 290 aaKnown RBP12.85□□□□□ -0.35
DDR1-275ENST00000514434 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.85□□□□□ -0.35
DDR1-275ENST00000514434 ZNF624Q9P2J8 865 aaPredicted RBP12.85□□□□□ -0.35
DDR1-275ENST00000514434 CCDC78A2IDD5 438 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 OR52A4PA6NMU1 304 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 EFCAB7A8K855 629 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 C9orf172C9J069 976 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 HGSO14964 777 aaPredicted RBP12.84□□□□□ -0.35
DDR1-275ENST00000514434 NVLO15381 856 aaKnown RBP12.84□□□□□ -0.35
DDR1-275ENST00000514434 KRT86O43790 486 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 PPFIA2O75334 1257 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 CRTAMO95727 393 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 FGF3P11487 239 aaPredicted RBP12.84□□□□□ -0.35
DDR1-275ENST00000514434 BRAFP15056 766 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 VCLP18206 1134 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 MSH3P20585 1137 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 SLC19A1P41440 591 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 UCNP55089 124 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 UBE2IP63279 158 aaKnown RBP12.84□□□□□ -0.35
DDR1-275ENST00000514434 SRSF6Q13247 344 aaKnown RBP12.84□□□□□ -0.35
DDR1-275ENST00000514434 SQSTM1Q13501 440 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 SEPT6Q14141 434 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 PARP6Q2NL67 630 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 FNBP1LQ5T0N5 605 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 SEL1L2Q5TEA6 688 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 TMEM164Q5U3C3 297 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 DENND5AQ6IQ26 1287 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 CCDC81Q6ZN84 652 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 C11orf96Q7Z7L8 435 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 AMZ2Q86W34 360 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 BEND7Q8N7W2 519 aaPredicted RBP12.84□□□□□ -0.35
DDR1-275ENST00000514434 AGBL5Q8NDL9 886 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 SLC35B2Q8TB61 432 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 ART4Q93070 314 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 LRRC45Q96CN5 670 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 CXorf40BQ96DE9 158 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 SGF29Q96ES7 293 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 DPYSL5Q9BPU6 564 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.84□□□□□ -0.35
DDR1-275ENST00000514434 LZTFL1Q9NQ48 299 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 OCIAD1Q9NX40 245 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 SLC39A1Q9NY26 324 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 PSMD13Q9UNM6 376 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 WDR37Q9Y2I8 494 aa12.84□□□□□ -0.35
DDR1-275ENST00000514434 ARHGAP6O43182 974 aa12.83□□□□□ -0.36
DDR1-275ENST00000514434 SRP72O76094 671 aaKnown RBP12.83□□□□□ -0.36
DDR1-275ENST00000514434 IFNB1P01574 187 aa12.83□□□□□ -0.36
DDR1-275ENST00000514434 AMD1P17707 334 aa12.83□□□□□ -0.36
DDR1-275ENST00000514434 EPHA4P54764 986 aa12.83□□□□□ -0.36
DDR1-275ENST00000514434 VAC14Q08AM6 782 aa12.83□□□□□ -0.36
DDR1-275ENST00000514434 MSLNQ13421 630 aaPredicted RBP12.83□□□□□ -0.36
DDR1-275ENST00000514434 TRA2AQ13595 282 aaKnown RBP eCLIP12.83□□□□□ -0.36
DDR1-275ENST00000514434 SNX1Q13596 522 aa12.83□□□□□ -0.36
DDR1-275ENST00000514434 NFE2L1Q14494 772 aa12.83□□□□□ -0.36
DDR1-275ENST00000514434 CLCA4Q14CN2 919 aa12.83□□□□□ -0.36
DDR1-275ENST00000514434 FAM83HQ6ZRV2 1179 aaPredicted RBP12.83□□□□□ -0.36
DDR1-275ENST00000514434 TMEM26Q6ZUK4 368 aa12.83□□□□□ -0.36
DDR1-275ENST00000514434 VASH2Q86V25 355 aa12.83□□□□□ -0.36
DDR1-275ENST00000514434 AVL9Q8NBF6 648 aa12.83□□□□□ -0.36
DDR1-275ENST00000514434 DDHD1Q8NEL9 900 aa12.83□□□□□ -0.36
DDR1-275ENST00000514434 DTX3LQ8TDB6 740 aa12.83□□□□□ -0.36
DDR1-275ENST00000514434 C1orf54Q8WWF1 131 aa12.83□□□□□ -0.36
DDR1-275ENST00000514434 PPP1R2P1Q96PQ5 205 aa12.83□□□□□ -0.36
DDR1-275ENST00000514434 UBL7Q96S82 380 aaPredicted RBP12.83□□□□□ -0.36
DDR1-275ENST00000514434 CCNL2Q96S94 520 aaPredicted RBP12.83□□□□□ -0.36
DDR1-275ENST00000514434 CRLS1Q9UJA2 301 aa12.83□□□□□ -0.36
DDR1-275ENST00000514434 SLC30A1Q9Y6M5 507 aa12.83□□□□□ -0.36
DDR1-275ENST00000514434 MGAQ8IWI9 3026 aa12.82□□□□□ -0.36
DDR1-275ENST00000514434 TEX51A0A1B0GUA7 166 aa12.82□□□□□ -0.36
DDR1-275ENST00000514434 ZNF189O75820 626 aaPredicted RBP12.82□□□□□ -0.36
DDR1-275ENST00000514434 PRB1P04280 392 aa12.82□□□□□ -0.36
DDR1-275ENST00000514434 LIPCP11150 499 aa12.82□□□□□ -0.36
DDR1-275ENST00000514434 XRCC1P18887 633 aaPredicted RBP12.82□□□□□ -0.36
DDR1-275ENST00000514434 HALP42357 657 aa12.82□□□□□ -0.36
DDR1-275ENST00000514434 ZNF140P52738 457 aaPredicted RBP12.82□□□□□ -0.36
DDR1-275ENST00000514434 GFERP55789 205 aa12.82□□□□□ -0.36
DDR1-275ENST00000514434 XIAPP98170 497 aa12.82□□□□□ -0.36
DDR1-275ENST00000514434 POU6F1Q14863 301 aa12.82□□□□□ -0.36
DDR1-275ENST00000514434 RPS6KA1Q15418 735 aa12.82□□□□□ -0.36
DDR1-275ENST00000514434 LONRF2Q1L5Z9 754 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms