RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 UGT1A6P19224 532 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 BTF3P20290 206 aaKnown RBP7.35□□□□□ -1.23
CLIP1-205ENST00000514271 UGT1A1P22309 533 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 UGT1A4P22310 534 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 PSMA2P25787 234 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 OXTRP30559 389 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 UGT1A3P35503 534 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 UGT1A5P35504 534 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 LTBRP36941 435 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 HADHAP40939 763 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 PHC1P78364 1004 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 GEN1Q17RS7 908 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 ALFQ53S48 1182 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 TECRLQ5HYJ1 363 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 PRSS36Q5K4E3 855 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 MROH9Q5TGP6 573 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 LPCAT2Q7L5N7 544 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 SLC26A9Q7LBE3 791 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 CYP2U1Q7Z449 544 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 LILRB1Q8NHL6 650 aaPredicted RBP7.35□□□□□ -1.23
CLIP1-205ENST00000514271 GIPC3Q8TF64 312 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 DNASE1L2Q92874 299 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 PCED1BQ96HM7 432 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 C1orf74Q96LT6 269 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 HEXIM2Q96MH2 286 aaKnown RBP7.35□□□□□ -1.23
CLIP1-205ENST00000514271 MUC13Q9H3R2 512 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 Q9H521 79 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 TASP1Q9H6P5 420 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 CMTM6Q9NX76 183 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 PCDHGA11Q9Y5H2 935 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 ANKRD28O15084 1053 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 CLPXO76031 633 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 AP2A1O95782 977 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 FYNP06241 537 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 USP17L7P0C7H9 530 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 GPD1P21695 349 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 CDH15P55291 814 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 CTAG1AP78358 180 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 PPP2R2BQ00005 443 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 ACVR1Q04771 509 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 TWF1Q12792 350 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 LRRC36Q1X8D7 754 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 IQCCQ4KMZ1 466 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 SETMARQ53H47 684 aaPredicted RBP7.35□□□□□ -1.23
CLIP1-205ENST00000514271 RAP1GAP2Q684P5 730 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 PTCRAQ6ISU1 281 aaPredicted RBP7.35□□□□□ -1.23
CLIP1-205ENST00000514271 Q7L0L9 218 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 MON1AQ86VX9 555 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 TMEM151BQ8IW70 566 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 EMC1Q8N766 993 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 OR13J1Q8NGT2 312 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 TMEM125Q96AQ2 219 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 FEM1AQ9BSK4 669 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 C12orf49Q9H741 205 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 ATP13A3Q9H7F0 1226 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 ZNF304Q9HCX3 659 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 RAB6BQ9NRW1 208 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 A0A087WXM4 84 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 TRBV5-3A0A0A0MS03 114 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 RFXAPO00287 272 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 CLOCKO15516 846 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 EIF2S1P05198 315 aaKnown RBP7.34□□□□□ -1.23
CLIP1-205ENST00000514271 ZDHHC11BP0C7U3 371 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 ARSAP15289 507 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 YWHAQP27348 245 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 HMOX2P30519 316 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 SSTR3P32745 418 aaPredicted RBP7.34□□□□□ -1.23
CLIP1-205ENST00000514271 SHMT2P34897 504 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 GRIK1P39086 918 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 MRPL28Q13084 256 aaKnown RBP7.34□□□□□ -1.23
CLIP1-205ENST00000514271 FLOT2Q14254 428 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 BOLA3Q53S33 107 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 ARL13AQ5H913 290 aaPredicted RBP7.34□□□□□ -1.23
CLIP1-205ENST00000514271 TMEM198Q66K66 360 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 PM20D1Q6GTS8 502 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 OGFOD2Q6N063 350 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 CAPN12Q6ZSI9 719 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 CEP97Q8IW35 865 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 FAM181AQ8N9Y4 354 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 TXNDC5Q8NBS9 432 aaKnown RBP7.34□□□□□ -1.23
CLIP1-205ENST00000514271 TNIP2Q8NFZ5 429 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 ELSPBP1Q96BH3 223 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 RMND5BQ96G75 393 aaPredicted RBP7.34□□□□□ -1.23
CLIP1-205ENST00000514271 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.34□□□□□ -1.23
CLIP1-205ENST00000514271 ABI2Q9NYB9 513 aaPredicted RBP7.34□□□□□ -1.23
CLIP1-205ENST00000514271 ACTR3BQ9P1U1 418 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 C2orf16Q68DN1 1984 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 TRAV19A0A0A6YYK7 116 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 FAM47E-STBD1D6RA91 191 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 TRIM13O60858 407 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 MTRF1O75570 445 aaKnown RBP7.34□□□□□ -1.23
CLIP1-205ENST00000514271 PEX11BO96011 259 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 KITP10721 976 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 TFDP2Q14188 446 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 IHHQ14623 411 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 CYP2A13Q16696 494 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 C15orf59Q2T9L4 293 aaPredicted RBP7.34□□□□□ -1.23
CLIP1-205ENST00000514271 CTU2Q2VPK5 515 aaKnown RBP7.34□□□□□ -1.23
CLIP1-205ENST00000514271 ARL13BQ3SXY8 428 aa7.34□□□□□ -1.23
CLIP1-205ENST00000514271 FAM182AQ5T1J6 154 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms