RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 TRAF6Q9Y4K3 522 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 TNPO3Q9Y5L0 923 aaKnown RBP8.27□□□□□ -1.09
RNF4-220ENST00000513578 PRSS21Q9Y6M0 314 aa8.27□□□□□ -1.09
RNF4-220ENST00000513578 PRRC2BQ5JSZ5 2229 aaKnown RBP8.27□□□□□ -1.09
RNF4-220ENST00000513578 COL4A2P08572 1712 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 OTOL1A6NHN0 477 aaPredicted RBP8.26□□□□□ -1.09
RNF4-220ENST00000513578 PRR5-ARHGAP8B1AHC4 643 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 SPECC1L-ADORA2AF8WAN1 911 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 BTN3A1O00481 513 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 SDHDO14521 159 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 UBFD1O14562 309 aaKnown RBP8.26□□□□□ -1.09
RNF4-220ENST00000513578 HGSO14964 777 aaPredicted RBP8.26□□□□□ -1.09
RNF4-220ENST00000513578 AREL1O15033 823 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 SLC16A5O15375 505 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 GSC2O15499 205 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 LINC01565O15544 149 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 BNIP3LO60238 219 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 NUAK1O60285 661 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 CDK14O94921 469 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 SLC25A14O95258 325 aaPredicted RBP8.26□□□□□ -1.09
RNF4-220ENST00000513578 MLYCDO95822 493 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 KRT16P08779 473 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 ENO2P09104 434 aaPredicted RBP8.26□□□□□ -1.09
RNF4-220ENST00000513578 OR56A5P0C7T3 313 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 LAMP2P13473 410 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 BMP1P13497 986 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 GFAPP14136 432 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 HNRNPLP14866 589 aaKnown RBP eCLIP8.26□□□□□ -1.09
RNF4-220ENST00000513578 POU3F3P20264 500 aaPredicted RBP8.26□□□□□ -1.09
RNF4-220ENST00000513578 XPAP23025 273 aaPredicted RBP8.26□□□□□ -1.09
RNF4-220ENST00000513578 GJA4P35212 333 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 GRIA2P42262 883 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 CCR10P46092 362 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 ATP4BP51164 291 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 HK3P52790 923 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 ARHGAP8P85298 464 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 CDKL1Q00532 357 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 B4GALNT1Q00973 533 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 CLCQ05315 142 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 LCP2Q13094 533 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 KLF10Q13118 480 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 ELAVL3Q14576 367 aaKnown RBP8.26□□□□□ -1.09
RNF4-220ENST00000513578 ZNF234Q14588 700 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 NAA25Q14CX7 972 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 PPP1R3AQ16821 1122 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 LSM12Q3MHD2 195 aaKnown RBP8.26□□□□□ -1.09
RNF4-220ENST00000513578 UGT3A2Q3SY77 523 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 TMEM52BQ4KMG9 183 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 DNAL1Q4LDG9 190 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 PLEKHS1Q5SXH7 462 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 VWA5B1Q5TIE3 1220 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 KANK2Q63ZY3 851 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 CES5AQ6NT32 575 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 SBSNQ6UWP8 590 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 LIPIQ6XZB0 460 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 RNF165Q6ZSG1 346 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 NUDT18Q6ZVK8 323 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 PARS2Q7L3T8 475 aaKnown RBP8.26□□□□□ -1.09
RNF4-220ENST00000513578 EFL1Q7Z2Z2 1120 aaKnown RBP8.26□□□□□ -1.09
RNF4-220ENST00000513578 HSD11B1LQ7Z5J1 315 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 DSG4Q86SJ6 1040 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 RASGRP3Q8IV61 690 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 YAF2Q8IY57 180 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 MYO1HQ8N1T3 1032 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 PELI3Q8N2H9 469 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 DDHD1Q8NEL9 900 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 CFAP61Q8NHU2 1237 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 AGAP11Q8TF27 550 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 UBTD2Q8WUN7 234 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 UTP4Q969X6 686 aaKnown RBP8.26□□□□□ -1.09
RNF4-220ENST00000513578 RAB7BQ96AH8 199 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 CMTM5Q96DZ9 223 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 PHF21BQ96EK2 531 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 PPP1R16AQ96I34 528 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 ZFYVE19Q96K21 471 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 COQ10AQ96MF6 247 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 RIPOR3Q96MK2 946 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 OR52B2Q96RD2 323 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 MYADMQ96S97 322 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 FAM129BQ96TA1 746 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 CCT7Q99832 543 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 BOCQ9BWV1 1114 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 NUSAP1Q9BXS6 441 aaKnown RBP8.26□□□□□ -1.09
RNF4-220ENST00000513578 FAM126AQ9BYI3 521 aaPredicted RBP8.26□□□□□ -1.09
RNF4-220ENST00000513578 PRO3102Q9H379 93 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 IGFLR1Q9H665 355 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 EPHX3Q9H6B9 360 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 KLC4Q9NSK0 619 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 CLEC1BQ9P126 229 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 ARMCX1Q9P291 453 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 TMPRSS11EQ9UL52 423 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 OARD1Q9Y530 152 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 MYO9BQ13459 2157 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 TICRRQ7Z2Z1 1910 aa8.26□□□□□ -1.09
RNF4-220ENST00000513578 CEP290O15078 2479 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 NPEPPSL1A6NEC2 478 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 B2RBV5 119 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 SUPT3HB4E1H0 165 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 CFAP99D6REC4 459 aa8.25□□□□□ -1.09
RNF4-220ENST00000513578 RFXAPO00287 272 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms