RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 KMOO15229 486 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 LRRTM2O43300 516 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 GADD45BO75293 160 aaPredicted RBP10.72□□□□□ -0.69
DDX41-216ENST00000513562 CAPN1P07384 714 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 ZNF7P17097 686 aaPredicted RBP10.72□□□□□ -0.69
DDX41-216ENST00000513562 FECHP22830 423 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 RPL10P27635 214 aaKnown RBP10.72□□□□□ -0.69
DDX41-216ENST00000513562 GSDMDP57764 484 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 RPL26P61254 145 aaKnown RBP10.72□□□□□ -0.69
DDX41-216ENST00000513562 ATP1A4Q13733 1029 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 DPYSL2Q16555 572 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 TCP11X2Q5H9J9 407 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 ZNF569Q5MCW4 686 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 PLEKHS1Q5SXH7 462 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 FAM69BQ5VUD6 431 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 SP5Q6BEB4 398 aaPredicted RBP10.72□□□□□ -0.69
DDX41-216ENST00000513562 LCN10Q6JVE6 187 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 ADGRG6Q86SQ4 1221 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 ZNF547Q8IVP9 402 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 DSELQ8IZU8 1212 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 OR8K5Q8NH50 307 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 ZNF501Q96CX3 271 aaPredicted RBP10.72□□□□□ -0.69
DDX41-216ENST00000513562 CXorf40BQ96DE9 158 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 CD180Q99467 661 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 MAP3K3Q99759 626 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 MLPHQ9BV36 600 aaPredicted RBP10.72□□□□□ -0.69
DDX41-216ENST00000513562 ILKAPQ9H0C8 392 aaPredicted RBP10.72□□□□□ -0.69
DDX41-216ENST00000513562 LATS2Q9NRM7 1088 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 KCND1Q9NSA2 647 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 PKD2L2Q9NZM6 624 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 RPL26L1Q9UNX3 145 aaKnown RBP10.72□□□□□ -0.69
DDX41-216ENST00000513562 PCDHGA10Q9Y5H3 936 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 HEATR9A2RTY3 570 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 TLCD2A6NGC4 264 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 RNF8O76064 485 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 SLC25A14O95258 325 aaPredicted RBP10.71□□□□□ -0.69
DDX41-216ENST00000513562 F8P00451 2351 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 KLK3P07288 261 aaPredicted RBP10.71□□□□□ -0.69
DDX41-216ENST00000513562 ATP1A3P13637 1013 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 AMPD1P23109 780 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 IL4RP24394 825 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 ITGA3P26006 1051 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 EEF1GP26641 437 aaKnown RBP10.71□□□□□ -0.69
DDX41-216ENST00000513562 HNRNPH3P31942 346 aaKnown RBP10.71□□□□□ -0.69
DDX41-216ENST00000513562 RORAP35398 523 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 ARL4DP49703 201 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 DRG2P55039 364 aaKnown RBP10.71□□□□□ -0.69
DDX41-216ENST00000513562 HSD11B2P80365 405 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 DSC2Q02487 901 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 ITKQ08881 620 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 GPR19Q15760 415 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 CAMK4Q16566 473 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 ZXDCQ2QGD7 858 aaPredicted RBP10.71□□□□□ -0.69
DDX41-216ENST00000513562 ANKRD20A8PQ5CZ79 823 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 LYPLAL1Q5VWZ2 237 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 PLEKHA7Q6IQ23 1121 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 ACAD10Q6JQN1 1059 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 KLHL35Q6PF15 583 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 FAM198BQ6UWH4 519 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 POLNQ7Z5Q5 900 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 LRRTM4Q86VH4 590 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 LPCAT1Q8NF37 534 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 SGSM3Q96HU1 749 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 CSPG4P5Q96PW8 444 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 AGPAT1Q99943 283 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 ZSCAN5AQ9BUG6 496 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 RUBCNLQ9H714 662 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 SAMSN1Q9NSI8 373 aaKnown RBP10.71□□□□□ -0.69
DDX41-216ENST00000513562 PARVAQ9NVD7 372 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 TAB2Q9NYJ8 693 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 DTLQ9NZJ0 730 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 WDR37Q9Y2I8 494 aa10.71□□□□□ -0.69
DDX41-216ENST00000513562 TMEM191CA6NGB0 347 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 PRSS44E7EML9 344 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 F5H423 210 aaPredicted RBP10.7□□□□□ -0.7
DDX41-216ENST00000513562 E2F3O00716 465 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 ATMINO43313 823 aaPredicted RBP10.7□□□□□ -0.7
DDX41-216ENST00000513562 VEGFDO43915 354 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 ZG16O60844 167 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 ALPPP05187 535 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 IDSP22304 550 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 CA4P22748 312 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 CES1P23141 567 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 SERPINB6P35237 376 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 ARL4AP40617 200 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 DCDC1P59894 354 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 MYBPC3Q14896 1274 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 NCF4Q15080 339 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 DPCR1Q3MIW9 517 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 DNTTIP2Q5QJE6 756 aaKnown RBP10.7□□□□□ -0.7
DDX41-216ENST00000513562 PRAMEF17Q5VTA0 474 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 PDPK2PQ6A1A2 396 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 Q6ZS92 163 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 CUZD1Q86UP6 607 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 LRRC49Q8IUZ0 686 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 GPR150Q8NGU9 434 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 ARRDC2Q8TBH0 407 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 CCHCR1Q8TD31 782 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 CPT1BQ92523 772 aa10.7□□□□□ -0.7
DDX41-216ENST00000513562 MAML1Q92585 1016 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms