RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 DSELQ8IZU8 1212 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 ZADH2Q8N4Q0 377 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLDND1-227ENST00000513452 PCMTD1Q96MG8 357 aaPredicted RBP10.28□□□□□ -0.76
CLDND1-227ENST00000513452 PEBP4Q96S96 227 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 EIF3CQ99613 913 aaKnown RBP10.28□□□□□ -0.76
CLDND1-227ENST00000513452 TUBB2BQ9BVA1 445 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 NT5MQ9NPB1 228 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 SEPT11Q9NVA2 429 aaKnown RBP10.28□□□□□ -0.76
CLDND1-227ENST00000513452 TMEM63CQ9P1W3 806 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 TRIM10Q9UDY6 481 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 PCSK1NQ9UHG2 260 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 DNPEPQ9ULA0 475 aa10.28□□□□□ -0.76
CLDND1-227ENST00000513452 C1orf232A0A0U1RR37 186 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 UBA6A0AVT1 1052 aaPredicted RBP10.27□□□□□ -0.77
CLDND1-227ENST00000513452 TLCD2A6NGC4 264 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 DDX3YO15523 660 aaKnown RBP10.27□□□□□ -0.77
CLDND1-227ENST00000513452 FZD6O60353 706 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 MAFKO60675 156 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 ZNF7P17097 686 aaPredicted RBP10.27□□□□□ -0.77
CLDND1-227ENST00000513452 IL4RP24394 825 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 PTGER4P35408 488 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 SPINT3P49223 89 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 HSD11B2P80365 405 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 ITKQ08881 620 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 DPYSQ14117 519 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 MYBPC3Q14896 1274 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 ANO6Q4KMQ2 910 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 ZNF569Q5MCW4 686 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 PPP1R15BQ5SWA1 713 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 ERMARDQ5T6L9 678 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 MARC1Q5VT66 337 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 IGFL3Q6UXB1 125 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 MRGPREQ86SM8 312 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 KMT5CQ86Y97 462 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 RAB43Q86YS6 212 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 D2HGDHQ8N465 521 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 ATPAF2Q8N5M1 289 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 CLEC1AQ8NC01 280 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 LPCAT1Q8NF37 534 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 OR8K5Q8NH50 307 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 NSMCE1Q8WV22 266 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 CPT1BQ92523 772 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 TM9SF4Q92544 642 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 ZNF501Q96CX3 271 aaPredicted RBP10.27□□□□□ -0.77
CLDND1-227ENST00000513452 CLIP3Q96DZ5 547 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 TUBGCP2Q9BSJ2 902 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 FAM83DQ9H4H8 585 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 KCND1Q9NSA2 647 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 SOHLH2Q9NX45 425 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 DTLQ9NZJ0 730 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 CWC15Q9P013 229 aaKnown RBP10.27□□□□□ -0.77
CLDND1-227ENST00000513452 CHKBQ9Y259 395 aa10.27□□□□□ -0.77
CLDND1-227ENST00000513452 MED13LQ71F56 2210 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 CHUKO15111 745 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 KMOO15229 486 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 SLC25A14O95258 325 aaPredicted RBP10.26□□□□□ -0.77
CLDND1-227ENST00000513452 CAPN1P07384 714 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 PSMA2P25787 234 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 SOX5P35711 763 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 ABRQ12979 859 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 NCF4Q15080 339 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 PLCL1Q15111 1095 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 PTCHD3Q3KNS1 767 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 ALS2CLQ60I27 953 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 KLHL35Q6PF15 583 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 TMCO3Q6UWJ1 677 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 ABRAXAS1Q6UWZ7 409 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 Q6ZS92 163 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 ADGRG6Q86SQ4 1221 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 LRRTM4Q86VH4 590 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 SYTL1Q8IYJ3 562 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 NXPE1Q8N323 547 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 GALNT16Q8N428 558 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 GPR150Q8NGU9 434 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 GRHL3Q8TE85 626 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 LRFN5Q96NI6 719 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 CD180Q99467 661 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 TIMM29Q9BSF4 260 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 SPATA16Q9BXB7 569 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 TLR10Q9BXR5 811 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 GANQ9H2C0 597 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 ZNF552Q9H707 407 aaPredicted RBP10.26□□□□□ -0.77
CLDND1-227ENST00000513452 ZBTB20Q9HC78 741 aaPredicted RBP10.26□□□□□ -0.77
CLDND1-227ENST00000513452 TRIM39Q9HCM9 518 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 NLRC4Q9NPP4 1024 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 ETNK2Q9NVF9 386 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 PKD2L2Q9NZM6 624 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 NOVA2Q9UNW9 492 aaKnown RBP10.26□□□□□ -0.77
CLDND1-227ENST00000513452 TTLL3Q9Y4R7 772 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 CSAG2Q9Y5P2 127 aa10.26□□□□□ -0.77
CLDND1-227ENST00000513452 PCNX1Q96RV3 2341 aa10.25□□□□□ -0.77
CLDND1-227ENST00000513452 A0A1B0GUH1 482 aa10.25□□□□□ -0.77
CLDND1-227ENST00000513452 GPR89AB7ZAQ6 455 aa10.25□□□□□ -0.77
CLDND1-227ENST00000513452 C9J4A7 227 aa10.25□□□□□ -0.77
CLDND1-227ENST00000513452 MASP2O00187 686 aa10.25□□□□□ -0.77
CLDND1-227ENST00000513452 PRPSAP2O60256 369 aa10.25□□□□□ -0.77
CLDND1-227ENST00000513452 MTX2O75431 263 aa10.25□□□□□ -0.77
CLDND1-227ENST00000513452 IPO13O94829 963 aaKnown RBP10.25□□□□□ -0.77
CLDND1-227ENST00000513452 LCA5LO95447 670 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms