RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 C3orf20Q8ND61 904 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 NEK11Q8NG66 645 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 UBXN4Q92575 508 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 EID2BQ96D98 161 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 LRFN5Q96NI6 719 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 CNPY3Q9BT09 278 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 GANQ9H2C0 597 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 DHX35Q9H5Z1 703 aaKnown RBP10.96□□□□□ -0.65
RNF4-218ENST00000513284 RUBCNLQ9H714 662 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 NLRC4Q9NPP4 1024 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 KCND1Q9NSA2 647 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 ETNK2Q9NVF9 386 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 CWC15Q9P013 229 aaKnown RBP10.96□□□□□ -0.65
RNF4-218ENST00000513284 SNX7Q9UNH6 387 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 AP4E1Q9UPM8 1137 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 WDR37Q9Y2I8 494 aa10.96□□□□□ -0.65
RNF4-218ENST00000513284 FBN3Q75N90 2809 aa10.96□□□□□ -0.66
RNF4-218ENST00000513284 SEC16AO15027 2179 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 CHUKO15111 745 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 CPNE3O75131 537 aaKnown RBP10.95□□□□□ -0.66
RNF4-218ENST00000513284 LCA5LO95447 670 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 SNRPB2P08579 225 aaKnown RBP10.95□□□□□ -0.66
RNF4-218ENST00000513284 ZNF30P17039 623 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 IL4RP24394 825 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 RPL10P27635 214 aaKnown RBP10.95□□□□□ -0.66
RNF4-218ENST00000513284 HSPA9P38646 679 aaKnown RBP10.95□□□□□ -0.66
RNF4-218ENST00000513284 SPINT3P49223 89 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 PER3P56645 1201 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 ACY1Q03154 408 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 ZNF235Q14590 738 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 MYBPC3Q14896 1274 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 SEPT7Q16181 437 aaKnown RBP10.95□□□□□ -0.66
RNF4-218ENST00000513284 HGSNATQ68CP4 663 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 DCUN1D2Q6PH85 259 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 MYO7BQ6PIF6 2116 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 FAM198BQ6UWH4 519 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 GDF7Q7Z4P5 450 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 ADGRG6Q86SQ4 1221 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 FJX1Q86VR8 437 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 PHYKPLQ8IUZ5 450 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 ZNF547Q8IVP9 402 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.95□□□□□ -0.66
RNF4-218ENST00000513284 GRHL3Q8TE85 626 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 TRIM8Q9BZR9 551 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 ILKAPQ9H0C8 392 aaPredicted RBP10.95□□□□□ -0.66
RNF4-218ENST00000513284 OR2AG1Q9H205 316 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 OSGEPL1Q9H4B0 414 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 LMBRD1Q9NUN5 540 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 TMEM63CQ9P1W3 806 aa10.95□□□□□ -0.66
RNF4-218ENST00000513284 A0A1B0GTL3 188 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 EIF3CLB5ME19 914 aaKnown RBP10.94□□□□□ -0.66
RNF4-218ENST00000513284 DDX3YO15523 660 aaKnown RBP10.94□□□□□ -0.66
RNF4-218ENST00000513284 KLF7O75840 302 aaPredicted RBP10.94□□□□□ -0.66
RNF4-218ENST00000513284 KLK3P07288 261 aaPredicted RBP10.94□□□□□ -0.66
RNF4-218ENST00000513284 ZNF7P17097 686 aaPredicted RBP10.94□□□□□ -0.66
RNF4-218ENST00000513284 PTGER4P35408 488 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 ANP32AP39687 249 aaKnown RBP10.94□□□□□ -0.66
RNF4-218ENST00000513284 DRG2P55039 364 aaKnown RBP10.94□□□□□ -0.66
RNF4-218ENST00000513284 RRADP55042 308 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 JAM2P57087 298 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 ABRQ12979 859 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 DPYSQ14117 519 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 KRT31Q15323 416 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 KYNUQ16719 465 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 CLEC16AQ2KHT3 1053 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 PLA2G4EQ3MJ16 856 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 ZNF789Q5FWF6 425 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 RALGPS1Q5JS13 557 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 ERMARDQ5T6L9 678 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 LYPLAL1Q5VWZ2 237 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 FBXO38Q6PIJ6 1188 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 SASS6Q6UVJ0 657 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 WASH2PQ6VEQ5 465 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 MON1BQ7L1V2 547 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 TMEM126BQ8IUX1 230 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 TRIM48Q8IWZ4 208 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 RAVER1Q8IY67 606 aaKnown RBP10.94□□□□□ -0.66
RNF4-218ENST00000513284 ITLN2Q8WWU7 325 aaPredicted RBP10.94□□□□□ -0.66
RNF4-218ENST00000513284 RELTQ969Z4 430 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 SGSM3Q96HU1 749 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 PPM1MQ96MI6 270 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 MCEEQ96PE7 176 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 EIF3CQ99613 913 aaKnown RBP10.94□□□□□ -0.66
RNF4-218ENST00000513284 SNRNP25Q9BV90 132 aaKnown RBP10.94□□□□□ -0.66
RNF4-218ENST00000513284 FAM83DQ9H4H8 585 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 TRIM39Q9HCM9 518 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 AGPAT4Q9NRZ5 378 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 POT1Q9NUX5 634 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 PCMTD2Q9NV79 361 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 TRIM10Q9UDY6 481 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 G3BP2Q9UN86 482 aaKnown RBP10.94□□□□□ -0.66
RNF4-218ENST00000513284 CHKBQ9Y259 395 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 DNAJC16Q9Y2G8 782 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 KLF2Q9Y5W3 355 aaPredicted RBP10.94□□□□□ -0.66
RNF4-218ENST00000513284 CCDC88CQ9P219 2028 aa10.94□□□□□ -0.66
RNF4-218ENST00000513284 DAPK3O43293 454 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 PRICKLE3O43900 615 aaPredicted RBP10.93□□□□□ -0.66
RNF4-218ENST00000513284 EDN3P14138 238 aa10.93□□□□□ -0.66
RNF4-218ENST00000513284 CDK11BP21127 795 aaKnown RBP10.93□□□□□ -0.66
RNF4-218ENST00000513284 FECHP22830 423 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms