RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 PRAMEF1O95521 474 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 ANXA4P09525 319 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-210ENST00000512756 LAG3P18627 525 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 SCNN1AP37088 669 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 PTPN5P54829 565 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 ITGA7Q13683 1181 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 SLC25A24Q6NUK1 477 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 RGMBQ6NW40 437 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 GALNT5Q7Z7M9 940 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 RSPH9Q9H1X1 276 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-210ENST00000512756 FZD8Q9H461 694 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 EVLQ9UI08 416 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-210ENST00000512756 GOT2P00505 430 aaKnown RBP12.36□□□□□ -0.43
COL11A1-210ENST00000512756 PEX2P28328 305 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 FAUP35544 74 aaKnown RBP12.36□□□□□ -0.43
COL11A1-210ENST00000512756 C5orf22Q49AR2 442 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 PIK3R6Q5UE93 754 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 MPP5Q8N3R9 675 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 ACAT2Q9BWD1 397 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 RASSF1Q9NS23 344 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 EVA1BQ9NVM1 165 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 OR5F1O95221 314 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 HSPA7P48741 367 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 C2orf80Q0P641 193 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 ADGRE1Q14246 886 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 HERC3Q15034 1050 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 KLHL35Q6PF15 583 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 MAB21L3Q8N8X9 362 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 C10orf82Q8WW14 230 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 NODALQ96S42 347 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 CXorf21Q9HAI6 301 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 MRTO4Q9UKD2 239 aaKnown RBP12.36□□□□□ -0.43
COL11A1-210ENST00000512756 UGT2B4P06133 528 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 AQP1P29972 269 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 GDF10P55107 478 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 NAE1Q13564 534 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 MED27Q6P2C8 311 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 FAR1Q8WVX9 515 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 LRTOMTQ8WZ04 291 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.43
COL11A1-210ENST00000512756 PDCD10Q9BUL8 212 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 FAM83DQ9H4H8 585 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 PHF11Q9UIL8 331 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 NEDD8-MDP1E9PL57 170 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 TREHO43280 583 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 CXCL14O95715 111 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 SDC2P34741 201 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 ASPAP45381 313 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 TEAD4Q15561 434 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 SLC10A6Q3KNW5 377 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 LDB1Q86U70 411 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-210ENST00000512756 FAM98AQ8NCA5 519 aaKnown RBP12.36□□□□□ -0.43
COL11A1-210ENST00000512756 MTMR14Q8NCE2 650 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 NTAN1Q96AB6 310 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 RAD51AP1Q96B01 352 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 FAM210AQ96ND0 272 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 PTTG2Q9NZH5 202 aa12.36□□□□□ -0.43
COL11A1-210ENST00000512756 NT5C1B-RDH14C9J2C7 533 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 PLOD3O60568 738 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 PIGRP01833 764 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 OR4Q2P0C623 313 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 CLCNKBP51801 687 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 TAS2R39P59534 338 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 ZNF730Q6ZMV8 503 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 ZBTB46Q86UZ6 589 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 NAT8LQ8N9F0 302 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 DPEP3Q9H4B8 488 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 PIP5K1BO14986 540 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 MT-CYBP00156 380 aaPredicted RBP12.35□□□□□ -0.43
COL11A1-210ENST00000512756 FOXN2P32314 431 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 LARS2Q15031 903 aaKnown RBP12.35□□□□□ -0.43
COL11A1-210ENST00000512756 PAOXQ6QHF9 649 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 P2RY8Q86VZ1 359 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 PARP8Q8N3A8 854 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 CLIP3Q96DZ5 547 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 HMCESQ96FZ2 354 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 TCF25Q9BQ70 676 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 TLL2Q9Y6L7 1015 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 OR4F21O95013 312 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 C22orf31O95567 290 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 C8GP07360 202 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 GMFBP60983 142 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 PRKD1Q15139 912 aaPredicted RBP12.35□□□□□ -0.43
COL11A1-210ENST00000512756 TAF1AQ15573 450 aaPredicted RBP12.35□□□□□ -0.43
COL11A1-210ENST00000512756 SNAPC1Q16533 368 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 DCST1Q5T197 706 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 XAGE5Q8WWM1 108 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 FCRL5Q96RD9 977 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 TFB2MQ9H5Q4 396 aaKnown RBP12.35□□□□□ -0.43
COL11A1-210ENST00000512756 IMP3Q9NV31 184 aaKnown RBP12.35□□□□□ -0.43
COL11A1-210ENST00000512756 PDE10AQ9Y233 779 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 FAM149AA5PLN7 773 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 ARHGEF33A8MVX0 844 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 NDUFS2O75306 463 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 TMEM63AO94886 807 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 CREB1P16220 341 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 GPD2P43304 727 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 ZNF132P52740 706 aa12.35□□□□□ -0.43
COL11A1-210ENST00000512756 SRSF11Q05519 484 aaKnown RBP12.35□□□□□ -0.43
COL11A1-210ENST00000512756 RALGPS1Q5JS13 557 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms