RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 IL7RP16871 459 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 ATP5C1P36542 298 aaKnown RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 PBX1P40424 430 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 VIPR2P41587 438 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 MTNR1AP48039 350 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 GATMP50440 423 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 HNRNPFP52597 415 aaKnown RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 CRYBB1P53674 252 aaPredicted RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 SHC2P98077 582 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 ECT2LQ008S8 904 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 CXCL9Q07325 125 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 RBBP5Q15291 538 aaKnown RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 COL28A1Q2UY09 1125 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 AP5B1Q2VPB7 878 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 ZNF789Q5FWF6 425 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 ARHGEF16Q5VV41 709 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 KRT39Q6A163 491 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 ARSKQ6UWY0 536 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 IGDCC3Q8IVU1 814 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 ZNF595Q8IYB9 648 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 LEMD2Q8NC56 503 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 DPF1Q92782 380 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 KCNJ9Q92806 393 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 SLC25A28Q96A46 364 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 SYTL4Q96C24 671 aaPredicted RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 VKORC1Q9BQB6 163 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 RIOX1Q9H6W3 641 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 SRD5A3Q9H8P0 318 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 RANGRFQ9HD47 186 aaPredicted RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 PRDM7Q9NQW5 492 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 NUDT15Q9NV35 164 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 TRNAU1APQ9NX07 287 aaKnown RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 PLK2Q9NYY3 685 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 OR6C3Q9NZP0 311 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 SLAMF8Q9P0V8 285 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 PLA2G4CQ9UP65 541 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 HBS1LQ9Y450 684 aaKnown RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 TBC1D3DA0A087WVF3 549 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 TBC1D3IA0A087WXS9 549 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 TBC1D3EA0A087X179 549 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 TBC1D3KA0A087X1G2 549 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 LNP1A1A4G5 178 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 TBC1D3BA6NDS4 549 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 TBC1D3FA6NER0 549 aaPredicted RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 TBC1D3LB9A6J9 549 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 MAP2K7O14733 419 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 ANKRD28O15084 1053 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 TEX28O15482 410 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 DCXO43602 365 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 PGK2P07205 417 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 CRYGCP07315 174 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 HMBSP08397 361 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 TBC1D3HP0C7X1 549 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 TACR1P25103 407 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 APEX1P27695 318 aaKnown RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 OTX2P32243 289 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 EVI2BP34910 448 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 RYKP34925 604 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 ALDH7A1P49419 539 aaKnown RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 NDUFV1P49821 464 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 ENTPD1P49961 510 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 HTR6P50406 440 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 SUCLG1P53597 346 aaKnown RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 DUSP8Q13202 625 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 SLC18A3Q16572 532 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 PDK4Q16654 411 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 CXorf66Q5JRM2 361 aaPredicted RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 C9orf50Q5SZB4 431 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 PHF19Q5T6S3 580 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 AFMIDQ63HM1 303 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 TBC1D3GQ6DHY5 549 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 TBC1D3CQ6IPX1 549 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 TEX38Q6PEX7 206 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 DPP8Q6V1X1 898 aaPredicted RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 CBLL1Q75N03 491 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 PPP1R32Q7Z5V6 425 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 STK32CQ86UX6 486 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 PDSS2Q86YH6 399 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 TBC1D3Q8IZP1 549 aaPredicted RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 TMIEQ8NEW7 156 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 OR10T2Q8NGX3 314 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 MBD3L2Q8NHZ7 208 aaPredicted RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 ATP8B4Q8TF62 1192 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 UBLCP1Q8WVY7 318 aaPredicted RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 CASKIN2Q8WXE0 1202 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 NPIPB3Q92617 1050 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 FCRL2Q96LA5 508 aaPredicted RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 HIST1H2AAQ96QV6 131 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 TMEM168Q9H0V1 697 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 KIF9Q9HAQ2 790 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 GBA2Q9HCG7 927 aaPredicted RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 MRPL47Q9HD33 250 aaKnown RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 NDUFA13Q9P0J0 144 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 SHOC2Q9UQ13 582 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 NIP7Q9Y221 180 aaKnown RBP eCLIP6.17□□□□□ -1.42
CHD1-208ENST00000512392 WBP11Q9Y2W2 641 aaKnown RBP6.17□□□□□ -1.42
CHD1-208ENST00000512392 PCDHB4Q9Y5E5 795 aa6.17□□□□□ -1.42
CHD1-208ENST00000512392 SBNO1A3KN83 1393 aa6.16□□□□□ -1.42
CHD1-208ENST00000512392 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.16□□□□□ -1.42
CHD1-208ENST00000512392 HEATR9A2RTY3 570 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms