RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 RRP8O43159 456 aaKnown RBP16.22■□□□□ 0.19
DDX41-213ENST00000512027 ZNF189O75820 626 aaPredicted RBP16.22■□□□□ 0.19
DDX41-213ENST00000512027 CRTAMO95727 393 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 AP2A1O95782 977 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 JMJD7P0C870 316 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 ZSCAN5DPP0CG00 497 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 SLC19A1P41440 591 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 CDKN1CP49918 316 aaPredicted RBP16.22■□□□□ 0.19
DDX41-213ENST00000512027 CLCNKAP51800 687 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 MAPK10P53779 464 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 UBE2IP63279 158 aaKnown RBP16.22■□□□□ 0.19
DDX41-213ENST00000512027 P3H1Q32P28 736 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 FNBP1LQ5T0N5 605 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 IGF2-ASQ6U949 168 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 FAM83HQ6ZRV2 1179 aaPredicted RBP16.22■□□□□ 0.19
DDX41-213ENST00000512027 SLC9B2Q86UD5 537 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 JAMLQ86YT9 394 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 ZNF248Q8NDW4 579 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 OR52K1Q8NGK4 314 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 SGF29Q96ES7 293 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 PPP1R2P1Q96PQ5 205 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 ETNK1Q9HBU6 452 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 SMOXQ9NWM0 555 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 ZNF624Q9P2J8 865 aaPredicted RBP16.22■□□□□ 0.19
DDX41-213ENST00000512027 CPNE7Q9UBL6 633 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 WDR37Q9Y2I8 494 aa16.22■□□□□ 0.19
DDX41-213ENST00000512027 KIR2DS5A0A0G2JLQ3 304 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 A0A0G2JNG1 304 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 TMX2-CTNND1H3BSU7 103 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 KIR2DS3K7RE56 304 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 POP7O75817 140 aaKnown RBP16.21■□□□□ 0.19
DDX41-213ENST00000512027 FGGP02679 453 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 ITGA2BP08514 1039 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 CCL4P13236 92 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 MSH3P20585 1137 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 MC4RP32245 332 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 GRIA1P42261 906 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 LIMK2P53671 638 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 TLE3Q04726 772 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 NFE2L1Q14494 772 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 KIR2DS5Q14953 304 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 CCDC38Q502W7 563 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 SNAP47Q5SQN1 464 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 CLEC14AQ86T13 490 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 PDZD3Q86UT5 571 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 TRIM58Q8NG06 486 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 KCNE4Q8WWG9 221 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 PMEPA1Q969W9 287 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 AHCYL2Q96HN2 611 aaKnown RBP16.21■□□□□ 0.19
DDX41-213ENST00000512027 ZCCHC2Q9C0B9 1178 aaKnown RBP16.21■□□□□ 0.19
DDX41-213ENST00000512027 STN1Q9H668 368 aaKnown RBP16.21■□□□□ 0.19
DDX41-213ENST00000512027 CRLS1Q9UJA2 301 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 PSMD13Q9UNM6 376 aa16.21■□□□□ 0.19
DDX41-213ENST00000512027 MGAQ8IWI9 3026 aa16.21■□□□□ 0.18
DDX41-213ENST00000512027 GOLGA6L3A6NEY3 463 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 A8MU76 341 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 DUX1O43812 170 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 CEP104O60308 925 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 THRAP10827 490 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 SLC2A4P14672 509 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 IDSP22304 550 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 SLC5A2P31639 672 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 KCNJ1P48048 391 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 GPLD1P80108 840 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 EIF3IQ13347 325 aaKnown RBP16.2■□□□□ 0.18
DDX41-213ENST00000512027 CLCA4Q14CN2 919 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 TRIM48Q8IWZ4 208 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 OR10G6Q8NH81 332 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 JPH3Q8WXH2 748 aaPredicted RBP16.2■□□□□ 0.18
DDX41-213ENST00000512027 NCSTNQ92542 709 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 LRRC45Q96CN5 670 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 FRMD8P1Q9BZ68 369 aaPredicted RBP16.2■□□□□ 0.18
DDX41-213ENST00000512027 WDR70Q9NW82 654 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 FOXJ2Q9P0K8 574 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 KLHL3Q9UH77 587 aa16.2■□□□□ 0.18
DDX41-213ENST00000512027 OR51F1A6NGY5 319 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 OR5K4A6NMS3 321 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 KLK10O43240 276 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 ZW10O43264 779 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 SGTAO43765 313 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 NRDCO43847 1150 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 PRAMEF10O60809 474 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 XRCC1P18887 633 aaPredicted RBP16.19■□□□□ 0.18
DDX41-213ENST00000512027 STIP1P31948 543 aaKnown RBP16.19■□□□□ 0.18
DDX41-213ENST00000512027 ARSDP51689 593 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 ZRANB3Q5FWF4 1079 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 XKR5Q6UX68 686 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 AMZ2Q86W34 360 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 NXPE1Q8N323 547 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 LILRA3Q8N6C8 439 aaPredicted RBP16.19■□□□□ 0.18
DDX41-213ENST00000512027 OR4D9Q8NGE8 314 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 GPR150Q8NGU9 434 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 USP7Q93009 1102 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 CMKLR1Q99788 373 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 KCNF1Q9H3M0 494 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 CPNE5Q9HCH3 593 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 RAB6BQ9NRW1 208 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 NLE1Q9NVX2 485 aaPredicted RBP16.19■□□□□ 0.18
DDX41-213ENST00000512027 OGFRQ9NZT2 677 aa16.19■□□□□ 0.18
DDX41-213ENST00000512027 FEZ2Q9UHY8 353 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms