RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 SRP72O76094 671 aaKnown RBP13.07□□□□□ -0.32
RNF4-215ENST00000511843 PRSS56P0CW18 603 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 CXCR5P32302 372 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 SLC19A1P41440 591 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 CDKN1CP49918 316 aaPredicted RBP13.07□□□□□ -0.32
RNF4-215ENST00000511843 CLCNKAP51800 687 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 UBE2IP63279 158 aaKnown RBP13.07□□□□□ -0.32
RNF4-215ENST00000511843 XIAPP98170 497 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 SIX1Q15475 284 aaPredicted RBP13.07□□□□□ -0.32
RNF4-215ENST00000511843 LDLRAP1Q5SW96 308 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 FNBP1LQ5T0N5 605 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 ZDHHC20Q5W0Z9 365 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 TMEM220Q6QAJ8 160 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 CLEC14AQ86T13 490 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 OR52K1Q8NGK4 314 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 OR10G6Q8NH81 332 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 BRSK1Q8TDC3 778 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 NCSTNQ92542 709 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 PMEPA1Q969W9 287 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 AHCYL2Q96HN2 611 aaKnown RBP13.07□□□□□ -0.32
RNF4-215ENST00000511843 TLR10Q9BXR5 811 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 ASB8Q9H765 288 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 ARNT2Q9HBZ2 717 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 CPNE5Q9HCH3 593 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 SARS2Q9NP81 518 aaKnown RBP13.07□□□□□ -0.32
RNF4-215ENST00000511843 FOXJ2Q9P0K8 574 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 KLHL3Q9UH77 587 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 PSMD13Q9UNM6 376 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 ZNF148Q9UQR1 794 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 WDR37Q9Y2I8 494 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 PPP2R2CQ9Y2T4 447 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 MGAQ8IWI9 3026 aa13.07□□□□□ -0.32
RNF4-215ENST00000511843 KIR2DS5A0A0G2JLQ3 304 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 A0A0G2JNG1 304 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 TMX2-CTNND1H3BSU7 103 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 KIR2DS3K7RE56 304 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 PPFIA2O75334 1257 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 POP7O75817 140 aaKnown RBP13.06□□□□□ -0.32
RNF4-215ENST00000511843 CRTAMO95727 393 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 AP2A1O95782 977 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 ZSCAN5DPP0CG00 497 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 SLC2A4P14672 509 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 TYRP1P17643 537 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 MSH3P20585 1137 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 LIMK2P53671 638 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 CXADRP78310 365 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 SRSF6Q13247 344 aaKnown RBP13.06□□□□□ -0.32
RNF4-215ENST00000511843 EIF3IQ13347 325 aaKnown RBP13.06□□□□□ -0.32
RNF4-215ENST00000511843 NFE2L1Q14494 772 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 KIR2DS5Q14953 304 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 TGIF1Q15583 401 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 P3H1Q32P28 736 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 CCDC38Q502W7 563 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 TRIM48Q8IWZ4 208 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 OR4D9Q8NGE8 314 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 DTX3LQ8TDB6 740 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 JPH3Q8WXH2 748 aaPredicted RBP13.06□□□□□ -0.32
RNF4-215ENST00000511843 USP7Q93009 1102 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 RTP4Q96DX8 246 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 SGF29Q96ES7 293 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 PPP1R2P1Q96PQ5 205 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 ALS2CR12Q96Q35 445 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 CMKLR1Q99788 373 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 ZCCHC2Q9C0B9 1178 aaKnown RBP13.06□□□□□ -0.32
RNF4-215ENST00000511843 STN1Q9H668 368 aaKnown RBP13.06□□□□□ -0.32
RNF4-215ENST00000511843 LRRC40Q9H9A6 602 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 GRPEL1Q9HAV7 217 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 ETNK1Q9HBU6 452 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 SMOXQ9NWM0 555 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 CRLS1Q9UJA2 301 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 SLC30A1Q9Y6M5 507 aa13.06□□□□□ -0.32
RNF4-215ENST00000511843 C9orf172C9J069 976 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 ZW10O43264 779 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 DUX1O43812 170 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 VIPP01282 170 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 THRAP10827 490 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 IDSP22304 550 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 GRIA1P42261 906 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 GFERP55789 205 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 GPLD1P80108 840 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 CLN3Q13286 438 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 CLCA4Q14CN2 919 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 TMEM71Q6P5X7 295 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 ZNF662Q6ZS27 426 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 AMZ2Q86W34 360 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 ZFAND4Q86XD8 727 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 GPR150Q8NGU9 434 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 FCRL3Q96P31 734 aaPredicted RBP13.05□□□□□ -0.32
RNF4-215ENST00000511843 PRORYQ9H606 182 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 OCIAD1Q9NX40 245 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 OGFRQ9NZT2 677 aa13.05□□□□□ -0.32
RNF4-215ENST00000511843 CFAP20Q9Y6A4 193 aaKnown RBP13.05□□□□□ -0.32
RNF4-215ENST00000511843 IGSF10Q6WRI0 2623 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 OR51F1A6NGY5 319 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 OR5K4A6NMS3 321 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 SGTAO43765 313 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 CEP104O60308 925 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 ZNF189O75820 626 aaPredicted RBP13.04□□□□□ -0.32
RNF4-215ENST00000511843 FGGP02679 453 aa13.04□□□□□ -0.32
RNF4-215ENST00000511843 FGF3P11487 239 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms