RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 HNRNPCP07910 306 aaKnown RBP eCLIP12.74□□□□□ -0.37
HMGB2-205ENST00000511316 TCF3P15923 654 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 SAT1P21673 171 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 HOXC13P31276 330 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 TNK2Q07912 1038 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 MERTKQ12866 999 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 TMED1Q13445 227 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 MTX3Q5HYI7 312 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 TBCELQ5QJ74 424 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 C6orf10Q5SRN2 563 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 TSTD2Q5T7W7 516 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 Q6ZNX1 250 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 TBC1D21Q8IYX1 336 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 SIX5Q8N196 739 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 MIER2Q8N344 545 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 CELF5Q8N6W0 485 aaKnown RBP12.74□□□□□ -0.37
HMGB2-205ENST00000511316 HEXDCQ8WVB3 486 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 OSCP1Q8WVF1 389 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 FBXO32Q969P5 355 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 WBP2Q969T9 261 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 ISOC1Q96CN7 298 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 GPATCH1Q9BRR8 931 aaKnown RBP12.74□□□□□ -0.37
HMGB2-205ENST00000511316 ADI1Q9BV57 179 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 LINC00597Q9H2U6 94 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 AGPAT4Q9NRZ5 378 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 A8MT66 165 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 STX16-NPEPL1H3BU86 382 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 ZSCAN9O15535 394 aaPredicted RBP12.74□□□□□ -0.37
HMGB2-205ENST00000511316 SLC7A4O43246 635 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 NCAM1P13591 858 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 PFKLP17858 780 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 TCN1P20061 433 aaPredicted RBP12.74□□□□□ -0.37
HMGB2-205ENST00000511316 DCKP27707 260 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 GDI1P31150 447 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 ADRA1AP35348 466 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 AVPR1AP37288 418 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 SLC1A2P43004 574 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 TAS2R39P59534 338 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 PRKCQQ04759 706 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 EPS8Q12929 822 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 SYPL2Q5VXT5 272 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 ZNF470Q6ECI4 717 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 PAOXQ6QHF9 649 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 LINC00299Q6ZSB3 139 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 LARP4Q71RC2 724 aaKnown RBP eCLIP12.74□□□□□ -0.375e-38■□□□□ 9.5
HMGB2-205ENST00000511316 CHCHD4Q8N4Q1 142 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 AADATQ8N5Z0 425 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 PCDH20Q8N6Y1 951 aaKnown RBP12.74□□□□□ -0.37
HMGB2-205ENST00000511316 RNF148Q8N7C7 305 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 FAM47BQ8NA70 645 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 BPIFB1Q8TDL5 484 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 ITPKCQ96DU7 683 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 C19orf60Q96EN9 201 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 DNAJC1Q96KC8 554 aaKnown RBP12.74□□□□□ -0.37
HMGB2-205ENST00000511316 RDH12Q96NR8 316 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 FBXO44Q9H4M3 255 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 NOL11Q9H8H0 719 aaKnown RBP12.74□□□□□ -0.37
HMGB2-205ENST00000511316 HPS4Q9NQG7 708 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 HEBP1Q9NRV9 189 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 IGSF5Q9NSI5 407 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 INTS10Q9NVR2 710 aaKnown RBP12.74□□□□□ -0.37
HMGB2-205ENST00000511316 CCDC167Q9P0B6 97 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 CA14Q9ULX7 337 aa12.74□□□□□ -0.37
HMGB2-205ENST00000511316 SYNJ2BP-COX16A0A087WUM0 186 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 TRIM64BA6NI03 449 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 FBP2O00757 339 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 USP17L7P0C7H9 530 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 GLULP15104 373 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 CD72P21854 359 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 GABRB3P28472 473 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 SLC7A2P52569 658 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 NRG1Q02297 640 aaPredicted RBP12.73□□□□□ -0.37
HMGB2-205ENST00000511316 GRSF1Q12849 480 aaKnown RBP eCLIP12.73□□□□□ -0.37
HMGB2-205ENST00000511316 ATP6AP1Q15904 470 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 SLC36A3Q495N2 470 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 KLHL35Q6PF15 583 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 SPATA19Q7Z5L4 167 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 SPRED1Q7Z699 444 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 PROSER1Q86XN7 944 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 FBXL6Q8N531 539 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 NPWQ8N729 165 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 TRPV3Q8NET8 790 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 SLCO4A1Q96BD0 722 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 THAP11Q96EK4 314 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 UBXN10Q96LJ8 280 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 PPP1R36Q96LQ0 422 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 PLEKHG4BQ96PX9 1271 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 CIB1Q99828 191 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 ULBP1Q9BZM6 244 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 GKN1Q9NS71 199 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.73□□□□□ -0.372e-35■■■□□ 15.2
HMGB2-205ENST00000511316 DUS2Q9NX74 493 aaKnown RBP12.73□□□□□ -0.37
HMGB2-205ENST00000511316 COX16Q9P0S2 106 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 PACSIN3Q9UKS6 424 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 B3GNT3Q9Y2A9 372 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 ZNF510Q9Y2H8 683 aa12.73□□□□□ -0.37
HMGB2-205ENST00000511316 KIF26AQ9ULI4 1882 aaPredicted RBP12.73□□□□□ -0.37
HMGB2-205ENST00000511316 TRAV19A0A0A6YYK7 116 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 RNF103-CHMP3A0A140T963 221 aa12.72□□□□□ -0.37
HMGB2-205ENST00000511316 A0A1W2PQH9 124 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms