RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 WBP2NLQ6ICG8 309 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 FBXL22Q6P050 247 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 ZNF852Q6ZMS4 543 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 GET4Q7L5D6 327 aaPredicted RBP6.64□□□□□ -1.35
USP53-206ENST00000510737 FAM228AQ86W67 206 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 ECHDC2Q86YB7 292 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 SEPT1Q8WYJ6 367 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 FRAT1Q92837 279 aaPredicted RBP6.64□□□□□ -1.35
USP53-206ENST00000510737 INPP4AQ96PE3 977 aaPredicted RBP6.64□□□□□ -1.35
USP53-206ENST00000510737 PCYT2Q99447 389 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 PRPF18Q99633 342 aaKnown RBP6.64□□□□□ -1.35
USP53-206ENST00000510737 SPRY4Q9C004 299 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 NT5C3AQ9H0P0 336 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 NAPBQ9H115 298 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 JMJD4Q9H9V9 463 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 SDF2L1Q9HCN8 221 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 TCP11L1Q9NUJ3 509 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 KLK13Q9UKR3 277 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 IGLV5-52A0A0A0MRZ9 124 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 IPO8O15397 1037 aaKnown RBP6.63□□□□□ -1.35
USP53-206ENST00000510737 FIBPO43427 364 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 SOCS5O75159 536 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 CXCL12P48061 93 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 TUBA1BP68363 451 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 GPATCH4Q5T3I0 446 aaKnown RBP6.63□□□□□ -1.35
USP53-206ENST00000510737 MTFR2Q6P444 385 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 TRIM74Q86UV6 250 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 TRIM73Q86UV7 250 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 LONP2Q86WA8 852 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 ENDOVQ8N8Q3 282 aaKnown RBP6.63□□□□□ -1.35
USP53-206ENST00000510737 PARD3BQ8TEW8 1205 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 TMEM255BQ8WV15 326 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 KIF1BPQ96EK5 621 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 TTC14Q96N46 770 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 NACAP1Q9BZK3 213 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 PLA2G2FQ9BZM2 168 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 SMARCAD1Q9H4L7 1026 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 LMAN1LQ9HAT1 526 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 HEBP1Q9NRV9 189 aa6.63□□□□□ -1.35
USP53-206ENST00000510737 MAP3K20Q9NYL2 800 aaKnown RBP6.63□□□□□ -1.35
USP53-206ENST00000510737 C2orf16Q68DN1 1984 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 LOXHD1Q8IVV2 1947 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 LAMA4Q16363 1823 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 AQP12BA6NM10 295 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 HSPB6O14558 160 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 TEX28O15482 410 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 ASAP2O43150 1006 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 KCNJ13O60928 360 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 TMCC1O94876 653 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 CLDN7O95471 211 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 IGLV2-11P01706 119 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 CEACAM1P13688 526 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 NAGAP17050 411 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 CCR3P51677 355 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 NTHL1P78549 312 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 TRAF2Q12933 501 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 ZRSR1Q15695 479 aaKnown RBP6.62□□□□□ -1.35
USP53-206ENST00000510737 SYTL3Q4VX76 610 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 HSP90AB4PQ58FF6 505 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 TCEAL6Q6IPX3 200 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 KRTAP5-1Q6L8H4 278 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 KBTBD3Q8NAB2 608 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 LILRB1Q8NHL6 650 aaPredicted RBP6.62□□□□□ -1.35
USP53-206ENST00000510737 TCEAL3Q969E4 200 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 NODALQ96S42 347 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 SLC22A11Q9NSA0 550 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 C2orf42Q9NWW7 574 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 IL36RNQ9UBH0 155 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 DNAJB4Q9UDY4 337 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 CDH7Q9ULB5 785 aa6.62□□□□□ -1.35
USP53-206ENST00000510737 NDRG2Q9UN36 371 aaKnown RBP6.62□□□□□ -1.35
USP53-206ENST00000510737 ZFP37Q9Y6Q3 630 aaPredicted RBP6.62□□□□□ -1.35
USP53-206ENST00000510737 USP9XQ93008 2570 aaPredicted RBP6.62□□□□□ -1.35
USP53-206ENST00000510737 MIA3Q5JRA6 1907 aa6.61□□□□□ -1.35
USP53-206ENST00000510737 A0A0U1RQF3 1178 aa6.61□□□□□ -1.35
USP53-206ENST00000510737 STAM2O75886 525 aa6.61□□□□□ -1.35
USP53-206ENST00000510737 LARGE1O95461 756 aa6.61□□□□□ -1.35
USP53-206ENST00000510737 CSRP1P21291 193 aaKnown RBP6.61□□□□□ -1.35
USP53-206ENST00000510737 SLC11A1P49279 550 aa6.61□□□□□ -1.35
USP53-206ENST00000510737 CRYBB1P53674 252 aaPredicted RBP6.61□□□□□ -1.35
USP53-206ENST00000510737 C5orf22Q49AR2 442 aa6.61□□□□□ -1.35
USP53-206ENST00000510737 ZNF771Q7L3S4 317 aaPredicted RBP6.61□□□□□ -1.35
USP53-206ENST00000510737 RFLNBQ8N5W9 214 aa6.61□□□□□ -1.35
USP53-206ENST00000510737 SAMD3Q8N6K7 520 aa6.61□□□□□ -1.35
USP53-206ENST00000510737 SLC35F5Q8WV83 523 aa6.61□□□□□ -1.35
USP53-206ENST00000510737 HMGB4Q8WW32 186 aa6.61□□□□□ -1.35
USP53-206ENST00000510737 FGF13Q92913 245 aa6.61□□□□□ -1.35
USP53-206ENST00000510737 KXD1Q9BQD3 176 aa6.61□□□□□ -1.35
USP53-206ENST00000510737 GAREM1Q9H706 876 aa6.61□□□□□ -1.35
USP53-206ENST00000510737 SEPSECSQ9HD40 501 aaKnown RBP6.61□□□□□ -1.35
USP53-206ENST00000510737 MRPL17Q9NRX2 175 aaKnown RBP6.61□□□□□ -1.35
USP53-206ENST00000510737 KRT36O76013 467 aa6.6□□□□□ -1.35
USP53-206ENST00000510737 POLR2MP0CAP2 368 aa6.6□□□□□ -1.35
USP53-206ENST00000510737 CDH12P55289 794 aa6.6□□□□□ -1.35
USP53-206ENST00000510737 SLC39A14Q15043 492 aa6.6□□□□□ -1.35
USP53-206ENST00000510737 ATG9BQ674R7 924 aa6.6□□□□□ -1.35
USP53-206ENST00000510737 KBTBD6Q86V97 674 aa6.6□□□□□ -1.35
USP53-206ENST00000510737 PALB2Q86YC2 1186 aa6.6□□□□□ -1.35
USP53-206ENST00000510737 ITFG1Q8TB96 612 aa6.6□□□□□ -1.35
USP53-206ENST00000510737 C2CD4CQ8TF44 421 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms