RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 RAB6CQ9H0N0 254 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 ACTR5Q9H9F9 607 aaPredicted RBP10.53□□□□□ -0.72
SNF8-207ENST00000509995 ST6GALNAC2Q9UJ37 374 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 PTRH2Q9Y3E5 179 aaKnown RBP10.53□□□□□ -0.72
SNF8-207ENST00000509995 A0A1W2PQ67 120 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 FOXO6A8MYZ6 492 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 AGPSO00116 658 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 P4HA2O15460 535 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 HTRA2O43464 458 aaPredicted RBP10.52□□□□□ -0.73
SNF8-207ENST00000509995 PRAMEF11O60813 436 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 PALMO75781 387 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 MST1P26927 711 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 SCNN1BP51168 640 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 ATP11AP98196 1134 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 SEPT7Q16181 437 aaKnown RBP10.52□□□□□ -0.73
SNF8-207ENST00000509995 ZNF789Q5FWF6 425 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 IRAK1BP1Q5VVH5 260 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 PRAMEF13Q5VWM6 474 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 ZNF385CQ66K41 422 aaPredicted RBP10.52□□□□□ -0.73
SNF8-207ENST00000509995 NLRP8Q86W28 1048 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 SMYD4Q8IYR2 804 aaPredicted RBP10.52□□□□□ -0.73
SNF8-207ENST00000509995 UMODL1-AS1Q8N2C9 162 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 CATSPER1Q8NEC5 780 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 MCCC1Q96RQ3 725 aaPredicted RBP10.52□□□□□ -0.73
SNF8-207ENST00000509995 ZNF559Q9BR84 538 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 CINPQ9BW66 212 aaPredicted RBP10.52□□□□□ -0.73
SNF8-207ENST00000509995 FANCEQ9HB96 536 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 KLC4Q9NSK0 619 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 ABI3Q9P2A4 366 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 MEMO1Q9Y316 297 aa10.52□□□□□ -0.73
SNF8-207ENST00000509995 UBA6A0AVT1 1052 aaPredicted RBP10.51□□□□□ -0.73
SNF8-207ENST00000509995 OR52A4PA6NMU1 304 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 PDZK1P1A8MUH7 402 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 BECN2A8MW95 431 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 SOCS5O75159 536 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 ALOX12BO75342 701 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 LCA5LO95447 670 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 ZBTB11O95625 1053 aaPredicted RBP10.51□□□□□ -0.73
SNF8-207ENST00000509995 BRAFP15056 766 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 CYP2A7P20853 494 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 AGXTP21549 392 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 PCSK6P29122 969 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 EPHB2P29323 1055 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 FKBP3Q00688 224 aaKnown RBP10.51□□□□□ -0.73
SNF8-207ENST00000509995 NSUN2Q08J23 767 aaKnown RBP eCLIP10.51□□□□□ -0.73
SNF8-207ENST00000509995 PTPRRQ15256 657 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 CDO1Q16878 200 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 PLA2G4EQ3MJ16 856 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 TMTC4Q5T4D3 741 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 KLHL35Q6PF15 583 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 TRIM72Q6ZMU5 477 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 NCCRP1Q6ZVX7 275 aaPredicted RBP10.51□□□□□ -0.73
SNF8-207ENST00000509995 WFDC11Q8NEX6 87 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 OR2Y1Q8NGV0 311 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 CA5BP1Q8WTZ4 195 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 C17orf62Q9BQA9 187 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 TLR10Q9BXR5 811 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 SLC6A20Q9NP91 592 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 SOHLH2Q9NX45 425 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 CNOT6Q9ULM6 557 aaKnown RBP10.51□□□□□ -0.73
SNF8-207ENST00000509995 PCDHA7Q9UN72 937 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 MTMR6Q9Y217 621 aa10.51□□□□□ -0.73
SNF8-207ENST00000509995 HRNRQ86YZ3 2850 aaPredicted RBP10.51□□□□□ -0.73
SNF8-207ENST00000509995 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.5□□□□□ -0.73
SNF8-207ENST00000509995 FAM171A2A8MVW0 826 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 WIPF1O43516 503 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 NUAK1O60285 661 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 MTA2O94776 668 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 CRYABP02511 175 aaKnown RBP10.5□□□□□ -0.73
SNF8-207ENST00000509995 GABRB2P47870 512 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 ME1P48163 572 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 ADCY2Q08462 1091 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 CES4AQ5XG92 561 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 LRRC66Q68CR7 880 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 USP45Q70EL2 814 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 B4GALNT4Q76KP1 1039 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 CCDC185Q8N715 623 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 EHBP1Q8NDI1 1231 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 ANKRD20A12PQ8NF67 263 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 CXorf40BQ96DE9 158 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 SCRN2Q96FV2 425 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 ZNF396Q96N95 335 aaPredicted RBP10.5□□□□□ -0.73
SNF8-207ENST00000509995 RIOK2Q9BVS4 552 aaKnown RBP10.5□□□□□ -0.73
SNF8-207ENST00000509995 SLC7A5P2Q9GIP4 190 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 CARD9Q9H257 536 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 LRRC19Q9H756 370 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 UBE2TQ9NPD8 197 aaPredicted RBP10.5□□□□□ -0.73
SNF8-207ENST00000509995 PLCB1Q9NQ66 1216 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 NPDC1Q9NQX5 325 aaPredicted RBP10.5□□□□□ -0.73
SNF8-207ENST00000509995 KCNN3Q9UGI6 736 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 TMEM59LQ9UK28 342 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 FBXL4Q9UKA2 621 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 ADAM21Q9UKJ8 722 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 ADGRG1Q9Y653 693 aa10.5□□□□□ -0.73
SNF8-207ENST00000509995 TRAV17A0A0B4J275 112 aa10.49□□□□□ -0.73
SNF8-207ENST00000509995 TMEM150CB9EJG8 249 aa10.49□□□□□ -0.73
SNF8-207ENST00000509995 DDX3YO15523 660 aaKnown RBP10.49□□□□□ -0.73
SNF8-207ENST00000509995 SLCO2B1O94956 709 aa10.49□□□□□ -0.73
SNF8-207ENST00000509995 ZWINTO95229 277 aa10.49□□□□□ -0.73
SNF8-207ENST00000509995 UMODP07911 640 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms