RNA–Protein interactions for RNA: ENST00000509620.6

OTUD4-208, Transcript of OTU deubiquitinase 4, humanhuman

TSL 1 (best) BASIC

Gene OTUD4, Length 864 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-208ENST00000509620 ACVR1CQ8NER5 493 aa4.11□□□□□ -1.75
OTUD4-208ENST00000509620 OR1J2Q8NGS2 313 aa4.11□□□□□ -1.75
OTUD4-208ENST00000509620 MEIS3Q99687 375 aa4.11□□□□□ -1.75
OTUD4-208ENST00000509620 C1QTNF4Q9BXJ3 329 aa4.11□□□□□ -1.75
OTUD4-208ENST00000509620 TMEM39BQ9GZU3 492 aa4.11□□□□□ -1.75
OTUD4-208ENST00000509620 C6orf106Q9H6K1 298 aaPredicted RBP4.11□□□□□ -1.75
OTUD4-208ENST00000509620 SMARCAL1Q9NZC9 954 aa4.11□□□□□ -1.75
OTUD4-208ENST00000509620 ZNF224Q9NZL3 707 aa4.11□□□□□ -1.75
OTUD4-208ENST00000509620 SELENONQ9NZV5 590 aa4.11□□□□□ -1.75
OTUD4-208ENST00000509620 AMACRQ9UHK6 382 aa4.11□□□□□ -1.75
OTUD4-208ENST00000509620 SIX4Q9UIU6 781 aa4.11□□□□□ -1.75
OTUD4-208ENST00000509620 PCDHGB1Q9Y5G3 927 aa4.11□□□□□ -1.75
OTUD4-208ENST00000509620 ARHGEF40Q8TER5 1519 aa4.11□□□□□ -1.75
OTUD4-208ENST00000509620 GPR75-ASB3A0A0A6YYF3 556 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 TRBC2A0A5B9 178 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 GGPS1O95749 300 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 GH2P01242 217 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 FGF3P11487 239 aaPredicted RBP4.1□□□□□ -1.75
OTUD4-208ENST00000509620 PRLRP16471 622 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 APOBEC1P41238 236 aaKnown RBP4.1□□□□□ -1.75
OTUD4-208ENST00000509620 MMP14P50281 582 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 TAS2R38P59533 333 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 TMF1P82094 1093 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 ROR1Q01973 937 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 EEF1A2Q05639 463 aaKnown RBP4.1□□□□□ -1.75
OTUD4-208ENST00000509620 KIF19Q2TAC6 998 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 TMEM198Q66K66 360 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 LCN10Q6JVE6 187 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 PAPD4Q6PIY7 484 aaKnown RBP4.1□□□□□ -1.75
OTUD4-208ENST00000509620 BRAT1Q6PJG6 821 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 CCDC186Q7Z3E2 898 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 VSIG1Q86XK7 387 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 LPGAT1Q92604 370 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 RMDN1Q96DB5 314 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 BICD1Q96G01 975 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 TMEM19Q96HH6 336 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 MTERF1Q99551 399 aaKnown RBP4.1□□□□□ -1.75
OTUD4-208ENST00000509620 CCDC106Q9BWC9 280 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 SPATC1LQ9H0A9 340 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 CSTL1Q9H114 145 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 SLCO5A1Q9H2Y9 848 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 MMP27Q9H306 513 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 DNAJC18Q9H819 358 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 DBNLQ9UJU6 430 aaKnown RBP4.1□□□□□ -1.75
OTUD4-208ENST00000509620 WBP11Q9Y2W2 641 aaKnown RBP4.1□□□□□ -1.75
OTUD4-208ENST00000509620 CCL27Q9Y4X3 112 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 TMEM184BQ9Y519 407 aaPredicted RBP4.1□□□□□ -1.75
OTUD4-208ENST00000509620 LRP12Q9Y561 859 aa4.1□□□□□ -1.75
OTUD4-208ENST00000509620 SAA2-SAA4A0A096LPE2 208 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 A0A0G2JPF8 293 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 PLSCR5A0PG75 271 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 EIF4E1BA6NMX2 242 aaKnown RBP4.09□□□□□ -1.75
OTUD4-208ENST00000509620 HNRNPCL2B2RXH8 293 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 HNRNPCL3B7ZW38 293 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 HS3ST1O14792 307 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 TBX10O75333 385 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 TBCAO75347 108 aaKnown RBP4.09□□□□□ -1.75
OTUD4-208ENST00000509620 HSPA4LO95757 839 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 QDPRP09417 244 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 CCDC175P0C221 793 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 HNRNPCL4P0DMR1 293 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 UGT1A1P22309 533 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 CORO1AP31146 461 aaKnown RBP4.09□□□□□ -1.75
OTUD4-208ENST00000509620 MATR3P43243 847 aaKnown RBP eCLIP4.09□□□□□ -1.75
OTUD4-208ENST00000509620 SUOXP51687 545 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 PPP5CP53041 499 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 SIRPAP78324 504 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 COASYQ13057 564 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 ALCAMQ13740 583 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 MYLK3Q32MK0 819 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 CRY2Q49AN0 593 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 IGSF11Q5DX21 431 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 KCNT1Q5JUK3 1230 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 CHST3Q7LGC8 479 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 PLPPR4Q7Z2D5 763 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 HAUS6Q7Z4H7 955 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 SLFN11Q7Z7L1 901 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 CCDC190Q86UF4 302 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 AACSQ86V21 672 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 TSPAN14Q8NG11 270 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 OR5R1Q8NH85 324 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 SPATA20Q8TB22 786 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 THAP6Q8TBB0 222 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 SLC20A1Q8WUM9 679 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 SPATA17Q96L03 361 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 CFAP57Q96MR6 1250 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 ZNF385AQ96PM9 386 aaKnown RBP4.09□□□□□ -1.75
OTUD4-208ENST00000509620 CTAGE1Q96RT6 745 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 DDX31Q9H8H2 851 aaKnown RBP4.09□□□□□ -1.75
OTUD4-208ENST00000509620 ZCCHC17Q9NP64 241 aaKnown RBP4.09□□□□□ -1.75
OTUD4-208ENST00000509620 GDE1Q9NZC3 331 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 LOXL2Q9Y4K0 774 aa4.09□□□□□ -1.75
OTUD4-208ENST00000509620 TMEM8BA6NDV4 472 aa4.08□□□□□ -1.76
OTUD4-208ENST00000509620 KRTAP29-1A8MX34 341 aaPredicted RBP4.08□□□□□ -1.76
OTUD4-208ENST00000509620 MAGEB17A8MXT2 336 aa4.08□□□□□ -1.76
OTUD4-208ENST00000509620 FAM90A26D6RGX4 464 aa4.08□□□□□ -1.76
OTUD4-208ENST00000509620 CLGNO14967 610 aa4.08□□□□□ -1.76
OTUD4-208ENST00000509620 KCNN4O15554 427 aa4.08□□□□□ -1.76
OTUD4-208ENST00000509620 RSL1D1O76021 490 aaKnown RBP4.08□□□□□ -1.76
OTUD4-208ENST00000509620 HLA-DOBP13765 273 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms