RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 CHRNA4P43681 627 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 PMS2P54278 862 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 ADCY2Q08462 1091 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 KLRB1Q12918 225 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 CHAF1BQ13112 559 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 DNASE1L3Q13609 305 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 PTPRCAPQ14761 206 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 AGAP9Q5VTM2 703 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 LUZP1Q86V48 1076 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 LRRTM4Q86VH4 590 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 FAM26EQ8N5C1 309 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 CCHCR1Q8TD31 782 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 SLC41A2Q96JW4 573 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 ZSCAN5AQ9BUG6 496 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 EFHD1Q9BUP0 239 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 STN1Q9H668 368 aaKnown RBP13.12□□□□□ -0.31
DDX41-210ENST00000509576 CBX8Q9HC52 389 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 MAGEE1Q9HCI5 957 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 LHX9Q9NQ69 397 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 UBP1Q9NZI7 540 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 SAE1Q9UBE0 346 aaPredicted RBP13.12□□□□□ -0.31
DDX41-210ENST00000509576 EPHA6Q9UF33 1036 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 LNPEPQ9UIQ6 1025 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 PCDHGA6Q9Y5G7 932 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 HEY1Q9Y5J3 304 aa13.12□□□□□ -0.31
DDX41-210ENST00000509576 MDC1Q14676 2089 aaKnown RBP13.12□□□□□ -0.31
DDX41-210ENST00000509576 PDZK1P1A8MUH7 402 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 KMOO15229 486 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 TOX3O15405 576 aaPredicted RBP13.11□□□□□ -0.31
DDX41-210ENST00000509576 UGT1A9O60656 530 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 KATNA1O75449 491 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 EBLN1P0CF75 366 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 SLC2A4P14672 509 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 AMD1P17707 334 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 UGT1A6P19224 532 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 UGT1A1P22309 533 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 UGT1A4P22310 534 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 ZBED6P86452 979 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 NFKBIBQ15653 356 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 HADHQ16836 314 aaKnown RBP13.11□□□□□ -0.31
DDX41-210ENST00000509576 FILIP1LQ4L180 1135 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 PRR30Q53SZ7 412 aaPredicted RBP13.11□□□□□ -0.31
DDX41-210ENST00000509576 PRAMEF17Q5VTA0 474 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 CACHD1Q5VU97 1274 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 IRGCQ6NXR0 463 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 DUS1LQ6P1R4 473 aaKnown RBP13.11□□□□□ -0.31
DDX41-210ENST00000509576 FBXO38Q6PIJ6 1188 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 KDELC1Q6UW63 502 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 WASH2PQ6VEQ5 465 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 RASGRP3Q8IV61 690 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 RASGEF1AQ8N9B8 481 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 VPS35Q96QK1 796 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 MAP3K3Q99759 626 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 GORASP1Q9BQQ3 440 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 RAB33BQ9H082 229 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 SLC25A51Q9H1U9 297 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 ACTL8Q9H568 366 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 UGT1A7Q9HAW7 530 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 UGT1A10Q9HAW8 530 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 UGT1A8Q9HAW9 530 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 IL26Q9NPH9 171 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 WASH6PQ9NQA3 447 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 POT1Q9NUX5 634 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 CTTNBP2NLQ9P2B4 639 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 POLHQ9Y253 713 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 CELSR2Q9HCU4 2923 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 ANKRD12Q6UB98 2062 aa13.11□□□□□ -0.31
DDX41-210ENST00000509576 NUP210LQ5VU65 1888 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 DOCK10Q96BY6 2186 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 SMTNL1A8MU46 457 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 GPR89AB7ZAQ6 455 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 F5H423 210 aaPredicted RBP13.1□□□□□ -0.31
DDX41-210ENST00000509576 DDX3YO15523 660 aaKnown RBP13.1□□□□□ -0.31
DDX41-210ENST00000509576 BUD23O43709 281 aaKnown RBP13.1□□□□□ -0.31
DDX41-210ENST00000509576 SGTAO43765 313 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 PMPCBO75439 489 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 RASSF9O75901 435 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 CDK14O94921 469 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 NTRK1P04629 796 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 GPR89BP0CG08 455 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 PECAM1P16284 738 aaPredicted RBP13.1□□□□□ -0.31
DDX41-210ENST00000509576 MX2P20592 715 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 CA4P22748 312 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 PTPN3P26045 913 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 CASP14P31944 242 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 MC1RQ01726 317 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 CDK18Q07002 472 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 AP1B1Q10567 949 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 WASHC5Q12768 1159 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 TMEM115Q12893 351 aaPredicted RBP13.1□□□□□ -0.31
DDX41-210ENST00000509576 SEMA5AQ13591 1074 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 IL11RAQ14626 422 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDX41-210ENST00000509576 NADK2Q4G0N4 442 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 PDPK2PQ6A1A2 396 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 CAPRIN2Q6IMN6 1127 aaKnown RBP13.1□□□□□ -0.31
DDX41-210ENST00000509576 CAVIN1Q6NZI2 390 aaKnown RBP13.1□□□□□ -0.31
DDX41-210ENST00000509576 ZNF517Q6ZMY9 492 aaPredicted RBP13.1□□□□□ -0.31
DDX41-210ENST00000509576 ASB18Q6ZVZ8 466 aa13.1□□□□□ -0.31
DDX41-210ENST00000509576 NT5DC3Q86UY8 548 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms