RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 CATSPER2Q96P56 530 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 VPS35Q96QK1 796 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 FCRL5Q96RD9 977 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 SPRY4Q9C004 299 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 UGT1A7Q9HAW7 530 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 UGT1A10Q9HAW8 530 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 UGT1A8Q9HAW9 530 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 IL26Q9NPH9 171 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.13■□□□□ 0.011e-13■■□□□ 12.2
TPM3-219ENST00000509409 OGFRQ9NZT2 677 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 TMPRSS11EQ9UL52 423 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.13■□□□□ 0.01
TPM3-219ENST00000509409 PKP3Q9Y446 797 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 H7C0C1 242 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 BUD23O43709 281 aaKnown RBP15.12■□□□□ 0.01
TPM3-219ENST00000509409 KCNJ13O60928 360 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 POP7O75817 140 aaKnown RBP15.12■□□□□ 0.01
TPM3-219ENST00000509409 EPOP01588 193 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 C9P02748 559 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 BRAFP15056 766 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 CHRNA4P43681 627 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 ATP5OP48047 213 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 ADCY2Q08462 1091 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 TAZQ16635 292 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 CACHD1Q5VU97 1274 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 IRGCQ6NXR0 463 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 C16orf46Q6P387 395 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 TMEM220Q6QAJ8 160 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 FAM151BQ6UXP7 276 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 WASH2PQ6VEQ5 465 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 AMZ2Q86W34 360 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 RASGRP3Q8IV61 690 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 RBM12BQ8IXT5 1001 aaKnown RBP15.12■□□□□ 0.01
TPM3-219ENST00000509409 ZNF567Q8N184 647 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 TTC30BQ8N4P2 665 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 ESX1Q8N693 406 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 ZDHHC12Q96GR4 267 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 ELMO2Q96JJ3 720 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 MRGPRX2Q96LB1 330 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 VAT1Q99536 393 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 HEMGNQ9BXL5 484 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 ZCCHC2Q9C0B9 1178 aaKnown RBP15.12■□□□□ 0.01
TPM3-219ENST00000509409 ADNPQ9H2P0 1102 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 GOLPH3Q9H4A6 298 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 WASH6PQ9NQA3 447 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 POT1Q9NUX5 634 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 HACD3Q9P035 362 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 IL17BQ9UHF5 180 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 RSPH14Q9UHP6 348 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 TMEM184BQ9Y519 407 aaPredicted RBP15.12■□□□□ 0.01
TPM3-219ENST00000509409 SDK2Q58EX2 2172 aa15.12■□□□□ 0.01
TPM3-219ENST00000509409 MN1Q10571 1320 aaPredicted RBP15.12■□□□□ 0.01
TPM3-219ENST00000509409 hCG_1818297A0A087WSY0 165 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 GLYATL1P3A0A0U1RQE8 302 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 HACD1B0YJ81 288 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 SUV39H1O43463 412 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 ANKRD34CP0C6C1 535 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 HLA-DPA1P20036 260 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 LEPRP48357 1165 aaKnown RBP15.11■□□□□ 0.01
TPM3-219ENST00000509409 POLE2P56282 527 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 MC1RQ01726 317 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 TBX2Q13207 712 aaPredicted RBP15.11■□□□□ 0.01
TPM3-219ENST00000509409 KCNAB2Q13303 367 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 MPP3Q13368 585 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 GPR18Q14330 331 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 SPA17Q15506 151 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 SLC1A5Q15758 541 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 DEFB109BQ30KR1 87 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 LDLRAP1Q5SW96 308 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 AGAP9Q5VTM2 703 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 C6orf15Q6UXA7 325 aaPredicted RBP15.11■□□□□ 0.01
TPM3-219ENST00000509409 FAM92BQ6ZTR7 304 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 PTRH1Q86Y79 214 aaKnown RBP15.11■□□□□ 0.01
TPM3-219ENST00000509409 KATNAL2Q8IYT4 538 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 OXNAD1Q96HP4 312 aaPredicted RBP15.11■□□□□ 0.01
TPM3-219ENST00000509409 RBM41Q96IZ5 413 aaKnown RBP15.11■□□□□ 0.01
TPM3-219ENST00000509409 OR6C1Q96RD1 312 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 FERMT1Q9BQL6 677 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 FSD1LQ9BXM9 530 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 ULBP3Q9BZM4 244 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 TRIM5Q9C035 493 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 SLC40A1Q9NP59 571 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 IL17CQ9P0M4 197 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 TRHDEQ9UKU6 1024 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 PCDHA13Q9Y5I0 950 aa15.11■□□□□ 0.01
TPM3-219ENST00000509409 STX7O15400 261 aaKnown RBP15.1■□□□□ 0.01
TPM3-219ENST00000509409 TOX3O15405 576 aaPredicted RBP15.1■□□□□ 0.01
TPM3-219ENST00000509409 KIF1CO43896 1103 aaKnown RBP15.1■□□□□ 0.01
TPM3-219ENST00000509409 TCN2P20062 427 aa15.1■□□□□ 0.01
TPM3-219ENST00000509409 MSH3P20585 1137 aa15.1■□□□□ 0.01
TPM3-219ENST00000509409 PBLDP30039 288 aaPredicted RBP15.1■□□□□ 0.01
TPM3-219ENST00000509409 CSRP3P50461 194 aa15.1■□□□□ 0.01
TPM3-219ENST00000509409 HADHBP55084 474 aaKnown RBP15.1■□□□□ 0.01
TPM3-219ENST00000509409 NAP1L1P55209 391 aaKnown RBP15.1■□□□□ 0.01
TPM3-219ENST00000509409 SH3BP2P78314 561 aa15.1■□□□□ 0.01
TPM3-219ENST00000509409 ITGA9Q13797 1035 aa15.1■□□□□ 0.01
TPM3-219ENST00000509409 C11orf96Q7Z7L8 435 aa15.1■□□□□ 0.01
TPM3-219ENST00000509409 DAAM2Q86T65 1068 aa15.1■□□□□ 0.01
TPM3-219ENST00000509409 RASGEF1AQ8N9B8 481 aa15.1■□□□□ 0.01
TPM3-219ENST00000509409 RSC1A1Q92681 617 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms