RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 MMEL1Q495T6 779 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 SYVN1Q86TM6 617 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 STK40Q8N2I9 435 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 BEND7Q8N7W2 519 aaPredicted RBP14.7□□□□□ -0.06
PHF3-209ENST00000509330 SLC39A3Q9BRY0 314 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 DCLRE1BQ9H816 532 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 CIDEBQ9UHD4 219 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 DHRS7Q9Y394 339 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 SYCE1LA8MT33 242 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 OR4F21O95013 312 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 DPP6P42658 865 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 HSPA7P48741 367 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 HSPA14Q0VDF9 509 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 LCP2Q13094 533 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 ARHGEF7Q14155 803 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 LRRC36Q1X8D7 754 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 UGT3A2Q3SY77 523 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 Q6ZVL8 140 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 NXPE1Q8N323 547 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 RTKNQ9BST9 563 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 C1orf50Q9BV19 199 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 ZNF385DQ9H6B1 395 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 GNPTGQ9UJJ9 305 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 PIKFYVEQ9Y2I7 2098 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 PSMA3P25788 255 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 DGKGP49619 791 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 BOP1Q14137 746 aaKnown RBP14.7□□□□□ -0.06
PHF3-209ENST00000509330 GRAMD4Q6IC98 578 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 KYQ8NBH2 561 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 NRG4Q8WWG1 115 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 DLG3Q92796 817 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 NXPE3Q969Y0 559 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 ATP6V1E2Q96A05 226 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 TRMOQ9BU70 441 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 NOL11Q9H8H0 719 aaKnown RBP14.7□□□□□ -0.06
PHF3-209ENST00000509330 ZMYM5Q9UJ78 669 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 PCTPQ9UKL6 214 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 PPM1HQ9ULR3 514 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 YBX2Q9Y2T7 364 aaKnown RBP14.7□□□□□ -0.06
PHF3-209ENST00000509330 C15orf41Q9Y2V0 281 aa14.7□□□□□ -0.06
PHF3-209ENST00000509330 VGLL3A8MV65 326 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 WASH3PC4AMC7 463 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 PSMD12O00232 456 aaPredicted RBP14.69□□□□□ -0.06
PHF3-209ENST00000509330 DDX6P26196 483 aaKnown RBP eCLIP14.69□□□□□ -0.067e-7■■■□□ 15.9
PHF3-209ENST00000509330 HK2P52789 917 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 SHHQ15465 462 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 SERPINA13PQ6UXR4 307 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 CERS6Q6ZMG9 384 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 HSD11B1LQ7Z5J1 315 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 PELI3Q8N2H9 469 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 RP9Q8TA86 221 aaKnown RBP14.69□□□□□ -0.06
PHF3-209ENST00000509330 TBC1D14Q9P2M4 693 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 KPNA3O00505 521 aaPredicted RBP14.69□□□□□ -0.06
PHF3-209ENST00000509330 CCNT2O60583 730 aaKnown RBP14.69□□□□□ -0.06
PHF3-209ENST00000509330 ADH5P11766 374 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 HGFP14210 728 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 NNMTP40261 264 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 CSNK1DP48730 415 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 RPL26P61254 145 aaKnown RBP14.69□□□□□ -0.06
PHF3-209ENST00000509330 B4GALNT1Q00973 533 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 PREPLQ4J6C6 727 aaPredicted RBP14.69□□□□□ -0.06
PHF3-209ENST00000509330 SLC44A4Q53GD3 710 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 RARS2Q5T160 578 aaKnown RBP14.69□□□□□ -0.06
PHF3-209ENST00000509330 SBSNQ6UWP8 590 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 NET1Q7Z628 596 aaPredicted RBP14.69□□□□□ -0.06
PHF3-209ENST00000509330 KIRREL3Q8IZU9 778 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 AHI1Q8N157 1196 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 MYO1HQ8N1T3 1032 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 PHOSPHO2Q8TCD6 241 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 MAGEC3Q8TD91 643 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 ACTRT2Q8TDY3 377 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 ECHDC3Q96DC8 303 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 FAR2Q96K12 515 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 WRAP53Q9BUR4 548 aaKnown RBP14.69□□□□□ -0.06
PHF3-209ENST00000509330 TRIM8Q9BZR9 551 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 RPL26L1Q9UNX3 145 aaKnown RBP14.69□□□□□ -0.06
PHF3-209ENST00000509330 POMPQ9Y244 141 aa14.69□□□□□ -0.06
PHF3-209ENST00000509330 MTCL1Q9Y4B5 1905 aaKnown RBP14.68□□□□□ -0.06
PHF3-209ENST00000509330 OR2AG2A6NM03 316 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 GIPC1O14908 333 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 TULP3O75386 442 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 RPS17P08708 135 aaKnown RBP14.68□□□□□ -0.06
PHF3-209ENST00000509330 GNAZP19086 355 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 XPAP23025 273 aaPredicted RBP14.68□□□□□ -0.06
PHF3-209ENST00000509330 SOX11P35716 441 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 THOP1P52888 689 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 DIO3P55073 304 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 ACTR3P61158 418 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 PLA2G4EQ3MJ16 856 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 ZBTB2Q8N680 514 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 MRGPRX3Q96LB0 322 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 COPS8Q99627 209 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 MTIF3Q9H2K0 278 aaKnown RBP14.68□□□□□ -0.06
PHF3-209ENST00000509330 WDR41Q9HAD4 459 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 PCDH12Q9NPG4 1184 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 ADA2Q9NZK5 511 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 POLG2Q9UHN1 485 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 PCDHB1Q9Y5F3 818 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 PRRT4C9JH25 899 aa14.68□□□□□ -0.06
PHF3-209ENST00000509330 NR5A2O00482 541 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms