RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 KIR2DS5Q14953 304 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 BCL7AQ4VC05 210 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 DNTTIP2Q5QJE6 756 aaKnown RBP9.01□□□□□ -0.97
NUP54-207ENST00000508583 KIAA0930Q6ICG6 404 aaPredicted RBP9.01□□□□□ -0.97
NUP54-207ENST00000508583 HIBCHQ6NVY1 386 aaPredicted RBP9.01□□□□□ -0.97
NUP54-207ENST00000508583 CRTC3Q6UUV7 619 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 CENPUQ71F23 418 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 SERPINA9Q86WD7 417 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 LRRC6Q86X45 466 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 ZDHHC1Q8WTX9 485 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 SH3KBP1Q96B97 665 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 ZNF669Q96BR6 464 aaPredicted RBP9.01□□□□□ -0.97
NUP54-207ENST00000508583 LINC00615Q96LM1 132 aaPredicted RBP9.01□□□□□ -0.97
NUP54-207ENST00000508583 CAMK1GQ96NX5 476 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 TCF12Q99081 682 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 TRIM51Q9BSJ1 452 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 FOXP3Q9BZS1 431 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 TRIM31Q9BZY9 425 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 PHACTR1Q9C0D0 580 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 TSPYL1Q9H0U9 437 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 OSGEPL1Q9H4B0 414 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 ARFGAP3Q9NP61 516 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 GULP1Q9UBP9 304 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 ACSL5Q9ULC5 683 aa9.01□□□□□ -0.97
NUP54-207ENST00000508583 PNMA8BQ9ULN7 279 aaPredicted RBP9.01□□□□□ -0.97
NUP54-207ENST00000508583 ZFC3H1O60293 1989 aaKnown RBP9.01□□□□□ -0.97
NUP54-207ENST00000508583 SPTBN4Q9H254 2564 aa9□□□□□ -0.97
NUP54-207ENST00000508583 C17orf113A0A1B0GUU1 675 aa9□□□□□ -0.97
NUP54-207ENST00000508583 CCDC78A2IDD5 438 aa9□□□□□ -0.97
NUP54-207ENST00000508583 OR2AG2A6NM03 316 aa9□□□□□ -0.97
NUP54-207ENST00000508583 B4DGG1 531 aa9□□□□□ -0.97
NUP54-207ENST00000508583 H3BMM5 538 aa9□□□□□ -0.97
NUP54-207ENST00000508583 CCL22O00626 93 aa9□□□□□ -0.97
NUP54-207ENST00000508583 EIF3HO15372 352 aaKnown RBP eCLIP9□□□□□ -0.97
NUP54-207ENST00000508583 CD3EAPO15446 510 aaKnown RBP9□□□□□ -0.97
NUP54-207ENST00000508583 NUDT21O43809 227 aaKnown RBP9□□□□□ -0.97
NUP54-207ENST00000508583 AVILO75366 819 aa9□□□□□ -0.97
NUP54-207ENST00000508583 NDUFS3O75489 264 aa9□□□□□ -0.97
NUP54-207ENST00000508583 VAPBO95292 243 aa9□□□□□ -0.97
NUP54-207ENST00000508583 FUCA1P04066 466 aa9□□□□□ -0.97
NUP54-207ENST00000508583 OR56A5P0C7T3 313 aa9□□□□□ -0.97
NUP54-207ENST00000508583 FTH1P19P0C7X4 201 aa9□□□□□ -0.97
NUP54-207ENST00000508583 GIMD1P0DJR0 217 aa9□□□□□ -0.97
NUP54-207ENST00000508583 F3P13726 295 aa9□□□□□ -0.97
NUP54-207ENST00000508583 GLB1P16278 677 aa9□□□□□ -0.97
NUP54-207ENST00000508583 OGNP20774 298 aaKnown RBP9□□□□□ -0.97
NUP54-207ENST00000508583 ACADVLP49748 655 aa9□□□□□ -0.97
NUP54-207ENST00000508583 ARSDP51689 593 aa9□□□□□ -0.97
NUP54-207ENST00000508583 FOXK2Q01167 660 aa9□□□□□ -0.97
NUP54-207ENST00000508583 ILF2Q12905 390 aaKnown RBP9□□□□□ -0.97
NUP54-207ENST00000508583 LONRF1Q17RB8 773 aa9□□□□□ -0.97
NUP54-207ENST00000508583 BBS9Q3SYG4 887 aa9□□□□□ -0.97
NUP54-207ENST00000508583 ANKRD20A4Q4UJ75 823 aa9□□□□□ -0.97
NUP54-207ENST00000508583 C14orf28Q4W4Y0 310 aa9□□□□□ -0.97
NUP54-207ENST00000508583 SPANXN3Q5MJ09 141 aa9□□□□□ -0.97
NUP54-207ENST00000508583 FNBP1LQ5T0N5 605 aa9□□□□□ -0.97
NUP54-207ENST00000508583 DUPD1Q68J44 220 aa9□□□□□ -0.97
NUP54-207ENST00000508583 OGFOD3Q6PK18 319 aa9□□□□□ -0.97
NUP54-207ENST00000508583 TMEM220Q6QAJ8 160 aa9□□□□□ -0.97
NUP54-207ENST00000508583 WASH2PQ6VEQ5 465 aa9□□□□□ -0.97
NUP54-207ENST00000508583 TMEM135Q86UB9 458 aa9□□□□□ -0.97
NUP54-207ENST00000508583 SLC9B2Q86UD5 537 aa9□□□□□ -0.97
NUP54-207ENST00000508583 RBM12BQ8IXT5 1001 aaKnown RBP9□□□□□ -0.97
NUP54-207ENST00000508583 GALNT15Q8N3T1 639 aa9□□□□□ -0.97
NUP54-207ENST00000508583 MMGT1Q8N4V1 131 aa9□□□□□ -0.97
NUP54-207ENST00000508583 RASGEF1AQ8N9B8 481 aa9□□□□□ -0.97
NUP54-207ENST00000508583 KYQ8NBH2 561 aa9□□□□□ -0.97
NUP54-207ENST00000508583 SERBP1Q8NC51 408 aaKnown RBP eCLIP9□□□□□ -0.97
NUP54-207ENST00000508583 GPR156Q8NFN8 814 aa9□□□□□ -0.97
NUP54-207ENST00000508583 HM13Q8TCT9 377 aa9□□□□□ -0.97
NUP54-207ENST00000508583 MAPK15Q8TD08 544 aa9□□□□□ -0.97
NUP54-207ENST00000508583 MFSD3Q96ES6 412 aa9□□□□□ -0.97
NUP54-207ENST00000508583 PANX3Q96QZ0 392 aa9□□□□□ -0.97
NUP54-207ENST00000508583 EBNA1BP2Q99848 306 aaKnown RBP9□□□□□ -0.97
NUP54-207ENST00000508583 CCM2Q9BSQ5 444 aa9□□□□□ -0.97
NUP54-207ENST00000508583 FAM167BQ9BTA0 163 aa9□□□□□ -0.97
NUP54-207ENST00000508583 ABCG4Q9H172 646 aa9□□□□□ -0.97
NUP54-207ENST00000508583 WASH6PQ9NQA3 447 aa9□□□□□ -0.97
NUP54-207ENST00000508583 KLC4Q9NSK0 619 aa9□□□□□ -0.97
NUP54-207ENST00000508583 INTS10Q9NVR2 710 aaKnown RBP9□□□□□ -0.97
NUP54-207ENST00000508583 SIRPGQ9P1W8 387 aa9□□□□□ -0.97
NUP54-207ENST00000508583 SLC2A6Q9UGQ3 507 aa9□□□□□ -0.97
NUP54-207ENST00000508583 GNPTGQ9UJJ9 305 aa9□□□□□ -0.97
NUP54-207ENST00000508583 TMPRSS11EQ9UL52 423 aa9□□□□□ -0.97
NUP54-207ENST00000508583 PADI4Q9UM07 663 aa9□□□□□ -0.97
NUP54-207ENST00000508583 BPTFQ12830 3046 aa9□□□□□ -0.97
NUP54-207ENST00000508583 ARHGEF17Q96PE2 2063 aaPredicted RBP9□□□□□ -0.97
NUP54-207ENST00000508583 PLXNB3Q9ULL4 1909 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 SPAARA0A1B0GVQ0 90 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 EME2A4GXA9 379 aaPredicted RBP8.99□□□□□ -0.97
NUP54-207ENST00000508583 MGAT4DA6NG13 374 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 RHPN2P1A8MT19 583 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 PDZK1P1A8MUH7 402 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 PRMT5O14744 637 aaPredicted RBP8.99□□□□□ -0.97
NUP54-207ENST00000508583 KPNA5O15131 536 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 GPR39O43194 453 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 SNX2O60749 519 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 POP7O75817 140 aaKnown RBP8.99□□□□□ -0.97
NUP54-207ENST00000508583 CELA2BP08218 269 aaPredicted RBP8.99□□□□□ -0.97
NUP54-207ENST00000508583 SLC35G4P0C7Q5 338 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms